Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_E21
         (473 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical pr...   141   2e-34
Z49129-2|CAA88961.1|  177|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical...    29   2.3  
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical...    29   2.3  
U29535-7|AAM81113.1|  275|Caenorhabditis elegans Hypothetical pr...    27   5.2  
Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical pr...    27   6.9  
AF098997-5|AAC68717.1|  218|Caenorhabditis elegans Insulin relat...    27   6.9  
Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81513-5|CAB04175.1|  332|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z81128-4|CAB03403.1|  898|Caenorhabditis elegans Hypothetical
           protein T23D8.4 protein.
          Length = 898

 Score =  141 bits (342), Expect = 2e-34
 Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 5/153 (3%)
 Frame = +1

Query: 19  YVERLKDEVRVSALIDRVCQVVE-RDGT----PQEICRAYLRKIDHLYYKFDPRAVRKDL 183
           Y+E+LK E  + +LI++  + VE R+ +      E+C+ Y+ +I+H YYK+  +      
Sbjct: 444 YIEKLKAEKDMCSLIEKAEKYVELRNDSGIFDKHEVCKVYMMRIEHAYYKYQDQ------ 497

Query: 184 PPGEETTIKKMERLCKYIYGHDETDRLRTRAILSHIYHHALHDNWFQARDLLLMSHLQET 363
              EE   K M+ LC  IY  D+  RLR RA+L H+Y+ A+HD W +ARDLLLMSH+Q  
Sbjct: 498 --NEEDAGKLMDYLCNKIYTLDDEKRLRQRAMLCHVYYLAVHDKWHRARDLLLMSHMQAI 555

Query: 364 VQHSDPSTQILYNRTMANLGLCAFRRGNVKEAH 462
           V HSD  TQILYNRT+  LGLCAFR G ++EAH
Sbjct: 556 VDHSDVDTQILYNRTICQLGLCAFRHGFIREAH 588


>Z49129-2|CAA88961.1|  177|Caenorhabditis elegans Hypothetical
           protein T05B9.2 protein.
          Length = 177

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
 Frame = +1

Query: 16  GYVERLKDEVRVSALIDRVCQ---VVERDGTPQ-EICRAYLRKIDHLYYKFDPRA--VRK 177
           G+ +  +DEVR   L D V     V+E D  P  E C+   RK+  LYY + P +   R 
Sbjct: 61  GFCQDDEDEVRYR-LQDHVIVGPIVMEADDVPDGEECKENCRKVGALYYSWRPNSDNQRS 119

Query: 178 DLPPGEE 198
           ++ P EE
Sbjct: 120 NVVPVEE 126


>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
 Frame = +1

Query: 70  VCQVVERDGTPQEICRAYLRKIDHLYYKFDPRAVRKDLPPGEETTIKKMER-LCKYIYGH 246
           +C V  + G    I RA       + +  D +  R  LP G +  ++ + R +   + G 
Sbjct: 113 ICNVENKSGDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGG 172

Query: 247 DETDRLRTRAILSHIYHHALHDNWFQARDLLL 342
             TD+   +A  S+  + A  ++W + R + +
Sbjct: 173 GRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAM 204


>AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical
           protein W02D3.10b protein.
          Length = 946

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 191 AKKQLSRKWKDFVNIFMVMMRPID 262
           +K   +++WKDFV +F+  +R ID
Sbjct: 181 SKMSFNQRWKDFVAVFIKKVRDID 204


>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
           protein W02D3.10a protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 191 AKKQLSRKWKDFVNIFMVMMRPID 262
           +K   +++WKDFV +F+  +R ID
Sbjct: 181 SKMSFNQRWKDFVAVFIKKVRDID 204


>U29535-7|AAM81113.1|  275|Caenorhabditis elegans Hypothetical
           protein C25H3.7b protein.
          Length = 275

 Score = 27.5 bits (58), Expect = 5.2
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = +2

Query: 140 TCITNSIHALCVKTSLRAKKQLSRKWKDFVNIFMVMMRPID*E--LAPFCHTFITML 304
           T +T         TSL+ K  L   WK+ V       RP + +  L+P+C    T L
Sbjct: 10  TTVTTCTFLRAASTSLQGKGPLKTNWKENVVYLYQFPRPANRQPNLSPYCLKIETFL 66


>Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical
           protein F45G2.3 protein.
          Length = 639

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -2

Query: 403 GCKESVYLGQSAEQFLGDET*VINRELGTSCHV 305
           GC + +++G+  + ++      +   LG  CHV
Sbjct: 41  GCMDKIHMGEETQSYVNYVNKYVKELLGMGCHV 73


>AF098997-5|AAC68717.1|  218|Caenorhabditis elegans Insulin related
           protein 31 protein.
          Length = 218

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 3/21 (14%)
 Frame = -2

Query: 202 LFLRPE---GGLYAQRVDRIC 149
           +F RPE   GGL  +RVDRIC
Sbjct: 25  MFARPEKTCGGLLIRRVDRIC 45


>Z82070-7|CAB04909.1|  321|Caenorhabditis elegans Hypothetical
           protein W04E12.8 protein.
          Length = 321

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 19/56 (33%), Positives = 30/56 (53%)
 Frame = +1

Query: 289 IYHHALHDNWFQARDLLLMSHLQETVQHSDPSTQILYNRTMANLGLCAFRRGNVKE 456
           +YH+A  ++  +A  +LL +HL  T  HS+       N  +ANL  C  + GN K+
Sbjct: 198 VYHNAKWED-AEAACVLLGAHL--TSVHSETE-----NTFVANLASCGIKEGNPKD 245


>Z81513-5|CAB04175.1|  332|Caenorhabditis elegans Hypothetical
           protein F26D2.4 protein.
          Length = 332

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 252 DRSIENSRHFVTHLSPCFT*QLVPSSRF 335
           D  I  +R +     PCF  Q++ SSRF
Sbjct: 160 DPDIARAREYARQKLPCFPPQIIDSSRF 187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,537,497
Number of Sequences: 27780
Number of extensions: 244770
Number of successful extensions: 734
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)