Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_E21
         (473 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   3.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   8.9  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/34 (23%), Positives = 15/34 (44%)
 Frame = +2

Query: 275 PFCHTFITMLYMTTGSKLAIYYSCLISKKLFSTL 376
           P C   +T  Y    S ++ Y  C++   ++  L
Sbjct: 182 PTCALDLTPTYAVVSSSISFYVPCIVMLGIYCRL 215


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +2

Query: 293 ITMLYMTTGSKLAIYYSCLISKKLFSTLTQVHR 391
           IT + +T     ++  +CL S KL+  L +  R
Sbjct: 879 ITSMSVTISLSASVTIACLFSPKLYIILIRPER 911


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +1

Query: 85  ERDGTPQEICRAYLRKIDHLYYKF 156
           +++   Q   RA+L+++DH  Y++
Sbjct: 497 QQEEQTQSRVRAHLKRLDHQPYQY 520


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +1

Query: 157 DPRAVRKDLPPGEETTIKKMERLCKYIYGHDETDR 261
           D +   + LP   + + KK+   CK I   D  ++
Sbjct: 76  DVQKALRHLPRSMQDSTKKLFNKCKSIQNEDPCEK 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,555
Number of Sequences: 438
Number of extensions: 2779
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)