Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_E14
         (200 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC109114-1|AAI09115.1|  950|Homo sapiens ADAM metallopeptidase w...    29   3.6  
AJ315733-1|CAC86014.1|  950|Homo sapiens metalloprotease disinte...    29   3.6  
BC059398-1|AAH59398.1|  327|Homo sapiens embigin homolog (mouse)...    28   4.8  
AF258559-1|AAG23762.1|  102|Homo sapiens PP3564 protein.               28   6.4  

>BC109114-1|AAI09115.1|  950|Homo sapiens ADAM metallopeptidase with
           thrombospondin type 1 motif, 15 protein.
          Length = 950

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 151 KPNHLCSPTLIHTQLCNPW 95
           + NH+ SPTLI     NPW
Sbjct: 385 RANHMMSPTLIQIDRANPW 403


>AJ315733-1|CAC86014.1|  950|Homo sapiens metalloprotease
           disintegrin 15 with thrombospondin domains protein.
          Length = 950

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 151 KPNHLCSPTLIHTQLCNPW 95
           + NH+ SPTLI     NPW
Sbjct: 385 RANHMMSPTLIQIDRANPW 403


>BC059398-1|AAH59398.1|  327|Homo sapiens embigin homolog (mouse)
           protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 186 SSPPLREDIGLQSQTTFAHQH*YTHNSATPGLKNLT 79
           +SPPLRE+I   + +  +H    T +S+ P  KN+T
Sbjct: 42  TSPPLREEIMANNFSLESHNISLTEHSSMPVEKNIT 77


>AF258559-1|AAG23762.1|  102|Homo sapiens PP3564 protein.
          Length = 102

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 37  AVLWGVLRRTF*RIGQIFKAXXXXXXXXXXXXSKGGLALEAYILAKWW*TVVV 195
           A +W V R T+ R+G++FK             S     ++ Y+L  WW T V+
Sbjct: 27  AQIWLVDRSTW-RVGELFKKTSLSTSLSADSDS-----IKEYLLQVWWLTPVI 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,274,082
Number of Sequences: 237096
Number of extensions: 646942
Number of successful extensions: 1566
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 76,859,062
effective HSP length: 45
effective length of database: 66,189,742
effective search space used: 1389984582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)