Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_E14
(200 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 0.80
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 1.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 20 2.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 20 2.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 20 2.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 20 2.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 2.4
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 20 3.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 19 4.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 5.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 19 7.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 7.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 7.4
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 19 7.4
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 19 7.4
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 18 9.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 18 9.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 18 9.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 18 9.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 18 9.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 18 9.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 18 9.8
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 18 9.8
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 18 9.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 18 9.8
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 18 9.8
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 18 9.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 18 9.8
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 0.80
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 147 GFGGLYPREVVVNCGG 194
GF G YP VVV G
Sbjct: 119 GFDGTYPTNVVVKNNG 134
Score = 21.8 bits (44), Expect = 0.80
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 198 PHHHSSPPLREDIGLQSQT 142
PHHH PP E G Q +T
Sbjct: 463 PHHHPHPP--ETPGPQVET 479
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 1.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 60 THILTYRSDF*GQGLQSCVCISVGEQRW 143
T +T RS QGL C + RW
Sbjct: 754 TTTITARSPQGSQGLLQCATSNYSTTRW 781
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 199 TTPPQFTTTSRGYRPPKP 146
TT F TTS G+R P
Sbjct: 338 TTMLNFFTTSNGFRSTLP 355
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 199 TTPPQFTTTSRGYRPPKP 146
TT F TTS G+R P
Sbjct: 307 TTMLNFFTTSNGFRSTLP 324
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 199 TTPPQFTTTSRGYRPPKP 146
TT F TTS G+R P
Sbjct: 358 TTMLNFFTTSNGFRSTLP 375
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 199 TTPPQFTTTSRGYRPPKP 146
TT F TTS G+R P
Sbjct: 307 TTMLNFFTTSNGFRSTLP 324
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.2 bits (40), Expect = 2.4
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 195 HHHSSPPLREDIGLQSQTTFAHQH*YTHNSATPGLKNLT 79
HH S +ED+ + H T SAT G+ + T
Sbjct: 405 HHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTT 443
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 19.8 bits (39), Expect = 3.2
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = +3
Query: 135 QRWFGFGG 158
Q WFGF G
Sbjct: 67 QAWFGFAG 74
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.4 bits (38), Expect = 4.3
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1
Query: 197 HTTTVHHHF 171
HTTT H+ F
Sbjct: 409 HTTTAHNRF 417
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 100 PWP*KSDRYVKM 65
PW ++RYVK+
Sbjct: 1108 PWTMDNERYVKV 1119
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 18.6 bits (36), Expect = 7.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 147 GFGGLYPREVVVNCGG 194
GF G Y VVV G
Sbjct: 82 GFDGTYQTSVVVTHNG 97
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 18.6 bits (36), Expect = 7.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 147 GFGGLYPREVVVNCGG 194
GF G Y VVV G
Sbjct: 150 GFDGTYQTNVVVTHNG 165
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 18.6 bits (36), Expect = 7.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 147 GFGGLYPREVVVNCGG 194
GF G Y VVV G
Sbjct: 150 GFDGTYQTNVVVTHNG 165
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 18.6 bits (36), Expect = 7.4
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = -3
Query: 189 HSSPPLREDIGLQSQTT 139
H SPP+++ + TT
Sbjct: 275 HGSPPVKQHRSSSASTT 291
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 18.6 bits (36), Expect = 7.4
Identities = 7/21 (33%), Positives = 9/21 (42%)
Frame = -3
Query: 186 SSPPLREDIGLQSQTTFAHQH 124
SSPP D+ + H H
Sbjct: 59 SSPPEHRDLPIYQSHHHLHHH 79
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 18.2 bits (35), Expect = 9.8
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 160 RPPKPNHLCSPT 125
+PPKP PT
Sbjct: 249 KPPKPQTKTKPT 260
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 18.2 bits (35), Expect = 9.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 147 GFGGLYPREVVVNCGG 194
GF G Y VVV G
Sbjct: 82 GFDGTYQTSVVVTHDG 97
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 18.2 bits (35), Expect = 9.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 147 GFGGLYPREVVVNCGG 194
GF G Y VVV G
Sbjct: 82 GFDGTYQTSVVVTHDG 97
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 18.2 bits (35), Expect = 9.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 147 GFGGLYPREVVVNCGG 194
GF G Y VVV G
Sbjct: 82 GFDGTYQTSVVVTHDG 97
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 18.2 bits (35), Expect = 9.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 147 GFGGLYPREVVVNCGG 194
GF G Y VVV G
Sbjct: 82 GFDGTYQTSVVVTHDG 97
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 18.2 bits (35), Expect = 9.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 147 GFGGLYPREVVVNCGG 194
GF G Y VVV G
Sbjct: 82 GFDGTYQTSVVVTHDG 97
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 18.2 bits (35), Expect = 9.8
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -2
Query: 154 PKPNHLCSPTLIHTQLCNPWP*KSDRYVKM 65
P P HL P +L P D+Y ++
Sbjct: 381 PAPQHLIHPGKDINKLYGMTPSDIDKYSRI 410
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 18.2 bits (35), Expect = 9.8
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -2
Query: 154 PKPNHLCSPTLIHTQLCNPWP*KSDRYVKM 65
P P HL P +L P D+Y ++
Sbjct: 381 PAPQHLIHPGKDINKLYGMTPSDIDKYSRI 410
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 18.2 bits (35), Expect = 9.8
Identities = 5/9 (55%), Positives = 5/9 (55%)
Frame = +2
Query: 146 WLWRPISSR 172
WLW P R
Sbjct: 72 WLWTPFIER 80
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 18.2 bits (35), Expect = 9.8
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +3
Query: 15 GTRVFLDCSFVGSVETHILTYRSD 86
GT ++C G+ + I+ R+D
Sbjct: 18 GTGAVVECQARGNPQPDIIWVRAD 41
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 18.2 bits (35), Expect = 9.8
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -2
Query: 154 PKPNHLCSPTLIHTQLCNPWP*KSDRYVKM 65
P P HL P +L P D+Y ++
Sbjct: 319 PAPQHLIHPGKDINKLYGMTPSDIDKYSRI 348
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 18.2 bits (35), Expect = 9.8
Identities = 4/7 (57%), Positives = 6/7 (85%)
Frame = +1
Query: 31 WIAVLWG 51
W++V WG
Sbjct: 164 WLSVFWG 170
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 18.2 bits (35), Expect = 9.8
Identities = 5/9 (55%), Positives = 5/9 (55%)
Frame = -1
Query: 200 HHTTTVHHH 174
HH HHH
Sbjct: 142 HHLQNHHHH 150
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,554
Number of Sequences: 438
Number of extensions: 1099
Number of successful extensions: 29
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 2659293
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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