Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_E08
         (400 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA ...    27   7.0  

>AE013599-453|AAF59228.1| 3242|Drosophila melanogaster CG2093-PA
            protein.
          Length = 3242

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 31   PTQLHISVLFSLLFLWYRRCVEINIYGKTNLFEINI 138
            P    +S+  +L + WYR   E+N+ G+    E+ +
Sbjct: 1274 PMSCTLSITRNLSYTWYRDVPELNLSGRLKSIELTL 1309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,744,841
Number of Sequences: 53049
Number of extensions: 367312
Number of successful extensions: 634
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)