Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_E08
         (400 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   1.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   1.7  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   5.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   5.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   6.9  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 189 IMEYSNNQIKELHNI 233
           + EYS++ I ELHNI
Sbjct: 275 VPEYSSSIIMELHNI 289


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 189 IMEYSNNQIKELHNI 233
           + EYS++ I ELHNI
Sbjct: 290 VPEYSSSIIMELHNI 304


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 241 SYRLECFALLFYQSLVCDGVMW 306
           SY +  F LLF     C  + W
Sbjct: 447 SYAVSGFCLLFLMFFECIAISW 468


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +1

Query: 241 SYRLECFALLFYQSLVCDGVMW 306
           SY +  F LLF     C  + W
Sbjct: 500 SYAVSGFCLLFLMFFECIAISW 521


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 141 ILRIVWWLVYV*YK 182
           +L I +W++YV Y+
Sbjct: 482 LLNICYWVIYVTYQ 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,892
Number of Sequences: 438
Number of extensions: 2780
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)