Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_E06
(180 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 0.59
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 0.59
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 20 2.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 20 3.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 20 3.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 20 3.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 20 3.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 19 4.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 19 4.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 19 4.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 19 5.5
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 19 7.2
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 19 7.2
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 19 7.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 18 9.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 18 9.6
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 18 9.6
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.2 bits (45), Expect = 0.59
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 5 CGLLLGTSWIPRVLQ*IPALRG 70
CG+ G SW+ R+ + L G
Sbjct: 688 CGIRAGLSWLERIQIALDVLEG 709
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.2 bits (45), Expect = 0.59
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 5 CGLLLGTSWIPRVLQ*IPALRG 70
CG+ G SW+ R+ + L G
Sbjct: 726 CGIRAGLSWLERIQIALDVLEG 747
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II
large subunit protein.
Length = 296
Score = 20.2 bits (40), Expect = 2.4
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3
Query: 72 IIKPKSIWT 98
I+KPK +WT
Sbjct: 40 ILKPKPLWT 48
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +3
Query: 99 LPVPLCWPKRRMVNIDYASIIE 164
+P P P+ + N Y +IE
Sbjct: 355 VPAPPVLPENHLKNAKYLDVIE 376
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +3
Query: 99 LPVPLCWPKRRMVNIDYASIIE 164
+P P P+ + N Y +IE
Sbjct: 355 VPAPPVLPENHLKNAKYLDVIE 376
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +3
Query: 99 LPVPLCWPKRRMVNIDYASIIE 164
+P P P+ + N Y +IE
Sbjct: 355 VPAPPVLPENHLKNAKYLDVIE 376
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.8 bits (39), Expect = 3.1
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = -2
Query: 131 SSFWPTQWDW 102
S FW + W W
Sbjct: 166 SVFWGSAWQW 175
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 155 RRIVDIYHS 129
+RI+D YHS
Sbjct: 423 KRIIDYYHS 431
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 155 RRIVDIYHS 129
+RI+D YHS
Sbjct: 423 KRIIDYYHS 431
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 19.4 bits (38), Expect = 4.1
Identities = 5/14 (35%), Positives = 10/14 (71%)
Frame = +3
Query: 66 GAIIKPKSIWTLPV 107
GA+ K +++W P+
Sbjct: 91 GALCKEEALWNFPM 104
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.0 bits (37), Expect = 5.5
Identities = 4/7 (57%), Positives = 6/7 (85%)
Frame = -2
Query: 128 SFWPTQW 108
+ WPT+W
Sbjct: 579 ALWPTEW 585
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 105 VPLCWPKRRMVNI 143
V L WPK+R+ +
Sbjct: 218 VKLNWPKKRVTKM 230
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = -3
Query: 115 HNGTGKVQIDLGLIIAPQCRNSLQH 41
H+GT +I+LG+ + + L++
Sbjct: 458 HSGTSLFRINLGIECGYEIKKLLRY 482
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -1
Query: 147 SRYLPFFFLANTMGL 103
++YL F F+ NT+ +
Sbjct: 297 AKYLLFTFIMNTVSI 311
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 45 CSEFRH*GAIIKPKSI 92
C+E H G+ K KSI
Sbjct: 95 CAEIAHGGSSKKRKSI 110
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 128 SFWPTQWDW 102
SFW Q+ W
Sbjct: 320 SFWLEQYSW 328
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = -2
Query: 128 SFWPTQWDW 102
SFW Q+ W
Sbjct: 288 SFWLEQYSW 296
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 18.2 bits (35), Expect = 9.6
Identities = 5/10 (50%), Positives = 7/10 (70%)
Frame = -2
Query: 119 PTQWDWQSPD 90
PT+ W SP+
Sbjct: 151 PTEASWHSPE 160
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,870
Number of Sequences: 438
Number of extensions: 938
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used: 2585220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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