Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_E05
         (429 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041170-1|AAH41170.1|  227|Homo sapiens candidate tumor suppres...    74   2e-13
AF335321-1|AAN04659.1|  227|Homo sapiens ovca2 protein.                74   2e-13
AF321875-1|AAL35713.1|  227|Homo sapiens candidate tumor suppres...    74   2e-13
BC040696-1|AAH40696.1|  227|Homo sapiens candidate tumor suppres...    72   1e-12
AF073528-1|AAC62628.1|  227|Homo sapiens ovarian cancer gene-2 p...    71   1e-12

>BC041170-1|AAH41170.1|  227|Homo sapiens candidate tumor suppressor
           in ovarian cancer 2 protein.
          Length = 227

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
 Frame = +1

Query: 16  GYRQNGALYRGKIGSFRKAVGKYAQLTFLSAPHKVVNEDG--------GG---DEDAMSW 162
           G+RQ+   +R K G+ RKA+   A+L  LS PH V +  G        G    +E    W
Sbjct: 14  GFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGSCPPEEQPRGW 73

Query: 163 WFNAED-NTFSGKCLGGPAI--GFEETLRLIEKVVKDHGPFDGFMGFSQCACLVGLLAAM 333
           WF+ ++ + FS   L  PA+  G EE+L ++ + +   GPFDG +GFSQ A L  L+ A+
Sbjct: 74  WFSEQEADVFSA--LEEPAVCRGLEESLGMVAQALNRLGPFDGLLGFSQGAALAALVCAL 131

Query: 334 QQKGYLPYSF-KFAIFASGF 390
            Q G   +   +F +  SGF
Sbjct: 132 GQAGDPRFPLPRFILLVSGF 151


>AF335321-1|AAN04659.1|  227|Homo sapiens ovca2 protein.
          Length = 227

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
 Frame = +1

Query: 16  GYRQNGALYRGKIGSFRKAVGKYAQLTFLSAPHKVVNEDG--------GG---DEDAMSW 162
           G+RQ+   +R K G+ RKA+   A+L  LS PH V +  G        G    +E    W
Sbjct: 14  GFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGSCPPEEQPRGW 73

Query: 163 WFNAED-NTFSGKCLGGPAI--GFEETLRLIEKVVKDHGPFDGFMGFSQCACLVGLLAAM 333
           WF+ ++ + FS   L  PA+  G EE+L ++ + +   GPFDG +GFSQ A L  L+ A+
Sbjct: 74  WFSEQEADVFSA--LEEPAVCRGLEESLGMVAQALNRLGPFDGLLGFSQGAALAALVCAL 131

Query: 334 QQKGYLPYSF-KFAIFASGF 390
            Q G   +   +F +  SGF
Sbjct: 132 GQAGDPRFPLPRFILLVSGF 151


>AF321875-1|AAL35713.1|  227|Homo sapiens candidate tumor suppressor
           OVCA2 protein.
          Length = 227

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
 Frame = +1

Query: 16  GYRQNGALYRGKIGSFRKAVGKYAQLTFLSAPHKVVNEDG--------GG---DEDAMSW 162
           G+RQ+   +R K G+ RKA+   A+L  LS PH V +  G        G    +E    W
Sbjct: 14  GFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGSCPPEEQPRGW 73

Query: 163 WFNAED-NTFSGKCLGGPAI--GFEETLRLIEKVVKDHGPFDGFMGFSQCACLVGLLAAM 333
           WF+ ++ + FS   L  PA+  G EE+L ++ + +   GPFDG +GFSQ A L  L+ A+
Sbjct: 74  WFSEQEADVFSA--LEEPAVCRGLEESLGMVAQALNRLGPFDGLLGFSQGAALAALVCAL 131

Query: 334 QQKGYLPYSF-KFAIFASGF 390
            Q G   +   +F +  SGF
Sbjct: 132 GQAGDPRFPLPRFILLVSGF 151


>BC040696-1|AAH40696.1|  227|Homo sapiens candidate tumor suppressor
           in ovarian cancer 2 protein.
          Length = 227

 Score = 71.7 bits (168), Expect = 1e-12
 Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
 Frame = +1

Query: 16  GYRQNGALYRGKIGSFRKAVGKYAQLTFLSAPHKVVNEDG--------GG---DEDAMSW 162
           G+RQ+   +R K G+ RKA+   A+L  LS PH V +  G        G    +E    W
Sbjct: 14  GFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGSCPPEEQPRGW 73

Query: 163 WFNAED-NTFSGKCLGGPAI--GFEETLRLIEKVVKDHGPFDGFMGFSQCACLVGLLAAM 333
           WF+ ++ + F    L  PA+  G EE+L ++ + +   GPFDG +GFSQ A L  L+ A+
Sbjct: 74  WFSEQEADVFCA--LEEPAVCRGLEESLGMVAQALNRLGPFDGLLGFSQGAALAALVCAL 131

Query: 334 QQKGYLPYSF-KFAIFASGF 390
            Q G   +   +F +  SGF
Sbjct: 132 GQAGDPRFPLPRFILLVSGF 151


>AF073528-1|AAC62628.1|  227|Homo sapiens ovarian cancer gene-2
           protein protein.
          Length = 227

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
 Frame = +1

Query: 16  GYRQNGALYRGKIGSFRKAVGKYAQLTFLSAPHKVVNEDG--------GG---DEDAMSW 162
           G+RQ+   +R K G+ RKA+   A+L  LS PH V +  G        G    +E    W
Sbjct: 14  GFRQSERGFREKTGALRKALRGRAELVCLSGPHPVPDPPGPEGARSDFGSCPPEEQPRGW 73

Query: 163 WFNAED-NTFSGKCLGGPAI--GFEETLRLIEKVVKDHGPFDGFMGFSQCACLVGLLAAM 333
           WF+ ++ + FS   L  PA+  G EE+L ++ + +   GPFDG +GFSQ A L  L+ A+
Sbjct: 74  WFSEQEADVFSA--LEEPAVCRGLEESLGMVAQALNRLGPFDGLLGFSQGAALAALVCAL 131

Query: 334 QQKGYLPYSF-KFAIFASGF 390
            Q G   +   +F +  S F
Sbjct: 132 GQAGDPRFPLPRFILLVSSF 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,682,436
Number of Sequences: 237096
Number of extensions: 1392122
Number of successful extensions: 2430
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2424
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)