Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_E04
         (494 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   5.7  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         22   10.0 
AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    22   10.0 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    22   10.0 

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 425 VPAPVYCMRHLLLANSHSFIDESNPDVRRYLLFLVKA 315
           VP P      L+  +    IDESN ++++Y   +VK+
Sbjct: 397 VPKPCCAPTKLIPISVLYHIDESNVNLKKYKNMVVKS 433


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 30  EPVLCVAFHPLGDHII 77
           +PV  +AFHP+G  I+
Sbjct: 185 QPVHPLAFHPIGGPIV 200


>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 117 TTSQCFVCPVPSHHHKR 167
           T S   V  +P+HHH R
Sbjct: 10  TLSVAMVFALPAHHHSR 26


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 194 RREFNRIDLSLMMVRW 147
           RREF R +   MM +W
Sbjct: 799 RREFARFEKERMMAKW 814


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,091
Number of Sequences: 2352
Number of extensions: 11108
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)