Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_E03
(215 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 0.56
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 23 0.97
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 22 3.0
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 22 3.0
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 21 5.2
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 21 5.2
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 21 5.2
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 21 5.2
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 21 5.2
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 21 5.2
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 21 5.2
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 21 5.2
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 21 6.9
AY331403-1|AAQ97584.1| 103|Anopheles gambiae agCP14332 protein. 20 9.1
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 20 9.1
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.2 bits (50), Expect = 0.56
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +2
Query: 125 LGGVRETRGDSGPAGP--RPGR 184
L G R +G+SGP GP PGR
Sbjct: 58 LTGHRGEKGNSGPVGPPGAPGR 79
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 134 VRETRGDSGPAGP 172
V + RG SGP+GP
Sbjct: 577 VWKDRGPSGPSGP 589
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 23.4 bits (48), Expect = 0.97
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 121 PTGRSPRDARRLRPCGTTTWSPLRP 195
P+ RSP RR R T+W RP
Sbjct: 269 PSCRSPPARRRSRSTRPTSWPRSRP 293
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 21.8 bits (44), Expect = 3.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 170 VPQGRSLLASLGLRPVGG 117
+P G S LG+RP GG
Sbjct: 556 LPPGLSAPLGLGMRPQGG 573
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 21.8 bits (44), Expect = 3.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 109 QVAPPTGRSPRDARRLRPCGTTT 177
+V+PP P +RRL P TT
Sbjct: 1101 EVSPPVPPIPPRSRRLPPSPRTT 1123
Score = 21.4 bits (43), Expect = 3.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 95 AQVRDAHALVHRLAHV 48
+QV HA VH HV
Sbjct: 928 SQVLSGHAFVHEFLHV 943
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 201 PTTTTTWSDLPP 212
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 201 PTTTTTWSDLPP 212
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 234 PTTTTTWSDLPP 245
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 234 PTTTTTWSDLPP 245
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 233 PTTTTTWSDLPP 244
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 233 PTTTTTWSDLPP 244
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 201 PTTTTTWSDLPP 212
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 234 PPTTTTWSDLPP 245
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 201 PTTTTTWSDLPP 212
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 234 PTTTTTWSDLPP 245
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 201 PTTTTTWSDLPP 212
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 160 PCGTTTWSPLRP 195
P TTTWS L P
Sbjct: 234 PTTTTTWSDLPP 245
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 20.6 bits (41), Expect = 6.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 120 SDWAESERREETPALRDHDLVA 185
+D +ESE EE+ L + LVA
Sbjct: 95 ADESESEESEESDELEEARLVA 116
>AY331403-1|AAQ97584.1| 103|Anopheles gambiae agCP14332 protein.
Length = 103
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +1
Query: 133 SPRDARRLRPCGTTTWSPLRPDET 204
+P + RR CG+ SP+ +T
Sbjct: 52 TPENVRRRTRCGSLCGSPVSRAQT 75
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 20.2 bits (40), Expect = 9.1
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 128 GGVRETRGDSGPAGPRPGRHCARTRP 205
G R G S PA P PG + RP
Sbjct: 61 GPDRPIPGRSHPAEPAPGGNGPFVRP 86
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,613
Number of Sequences: 2352
Number of extensions: 2155
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 49
effective length of database: 448,731
effective search space used: 9872082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -