Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_E03
         (215 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   0.18 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   0.41 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            19   8.8  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.2 bits (50), Expect = 0.18
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 114 GSSDWAESERREETPALRDHDLVAT 188
           GS  W + +      ALR+HD+  T
Sbjct: 407 GSKSWTQEDMDAALEALRNHDMSLT 431


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 0.41
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 124 TGRSPRDARRLRPCGTTTWSPLRPDETFV 210
           T RSP+ ++ L  C T+ +S  R   T V
Sbjct: 758 TARSPQGSQGLLQCATSNYSTTRWPATSV 786


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 157 GVSSRLSDSAQSEEPPDLRT 98
           GV+    D+A+   P DLRT
Sbjct: 200 GVAGFRVDAAKHMWPSDLRT 219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,370
Number of Sequences: 438
Number of extensions: 513
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)