Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_E01
(465 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024410-1|ABC86472.1| 274|Drosophila melanogaster IP03973p pro... 41 7e-04
AF124501-1|AAD31690.1| 274|Drosophila melanogaster DNA repair p... 41 7e-04
AE014134-429|AAF51241.2| 274|Drosophila melanogaster CG3240-PA ... 41 7e-04
BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p pro... 31 0.77
BT011057-1|AAR31128.1| 996|Drosophila melanogaster RE40649p pro... 31 0.77
BT028840-1|ABI34221.2| 232|Drosophila melanogaster RT01103p pro... 29 2.3
BT028810-1|ABI34191.2| 232|Drosophila melanogaster RT01003p pro... 29 2.3
AE014297-508|AAF54088.1| 252|Drosophila melanogaster CG1048-PA ... 29 2.3
AE001572-11|AAD19801.1| 252|Drosophila melanogaster DNA-binding... 29 2.3
BT001632-1|AAN71387.1| 739|Drosophila melanogaster RE38584p pro... 28 7.1
AY084162-1|AAL89900.1| 331|Drosophila melanogaster RE37150p pro... 28 7.1
AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA... 28 7.1
AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-P... 28 7.1
AY119610-1|AAM50264.1| 825|Drosophila melanogaster LD34829p pro... 27 9.4
AE013599-2414|AAM68495.2| 810|Drosophila melanogaster CG6967-PB... 27 9.4
AE013599-2413|AAF57908.2| 825|Drosophila melanogaster CG6967-PA... 27 9.4
>BT024410-1|ABC86472.1| 274|Drosophila melanogaster IP03973p
protein.
Length = 274
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 10 KILCSLLKAIQFQETAVFCALPEGLKLTVEEGKCVQASAYVPADNFTEYNVKE 168
K +K+I F + + +GL++TVE+GK +QA+ ++P F E+ V++
Sbjct: 22 KTFIQAIKSICFNDYGMVQVSEDGLRITVEQGKSIQATLFMPPGAFMEFRVQD 74
>AF124501-1|AAD31690.1| 274|Drosophila melanogaster DNA repair
protein Rad1 protein.
Length = 274
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 10 KILCSLLKAIQFQETAVFCALPEGLKLTVEEGKCVQASAYVPADNFTEYNVKE 168
K +K+I F + + +GL++TVE+GK +QA+ ++P F E+ V++
Sbjct: 22 KTFIQAIKSICFNDYGMVQVSEDGLRITVEQGKSIQATLFMPPGAFMEFRVQD 74
>AE014134-429|AAF51241.2| 274|Drosophila melanogaster CG3240-PA
protein.
Length = 274
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 10 KILCSLLKAIQFQETAVFCALPEGLKLTVEEGKCVQASAYVPADNFTEYNVKE 168
K +K+I F + + +GL++TVE+GK +QA+ ++P F E+ V++
Sbjct: 22 KTFIQAIKSICFNDYGMVQVSEDGLRITVEQGKSIQATLFMPPGAFMEFRVQD 74
>BT011063-1|AAR31134.1| 1037|Drosophila melanogaster LD21010p
protein.
Length = 1037
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 16 LCSLLKAIQFQETAVFCALPEGLKLTVEEGKCVQASAYVP 135
LC I + + CA P GLKL V+ CV+ Y+P
Sbjct: 835 LCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDPLYLP 874
>BT011057-1|AAR31128.1| 996|Drosophila melanogaster RE40649p
protein.
Length = 996
Score = 31.1 bits (67), Expect = 0.77
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 16 LCSLLKAIQFQETAVFCALPEGLKLTVEEGKCVQASAYVP 135
LC I + + CA P GLKL V+ CV+ Y+P
Sbjct: 794 LCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDPLYLP 833
>BT028840-1|ABI34221.2| 232|Drosophila melanogaster RT01103p
protein.
Length = 232
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = -1
Query: 465 NTSQDRSKSANRPRNAGALRTSLAISAQSSSRNSNTESAVCV*ISQSVTTLLT------D 304
N KS NR GAL TS+ +S+QSS + V + + T + T D
Sbjct: 73 NRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAPLRQVD 132
Query: 303 NGCKTNSSGDPSHL*YIFRLDSSPEPNIL 217
+G P + Y + + SPEP L
Sbjct: 133 HGVLEEGQITPPYQSYDYLHEFSPEPMAL 161
>BT028810-1|ABI34191.2| 232|Drosophila melanogaster RT01003p
protein.
Length = 232
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = -1
Query: 465 NTSQDRSKSANRPRNAGALRTSLAISAQSSSRNSNTESAVCV*ISQSVTTLLT------D 304
N KS NR GAL TS+ +S+QSS + V + + T + T D
Sbjct: 73 NRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAPLRQVD 132
Query: 303 NGCKTNSSGDPSHL*YIFRLDSSPEPNIL 217
+G P + Y + + SPEP L
Sbjct: 133 HGVLEEGQITPPYQSYDYLHEFSPEPMAL 161
>AE014297-508|AAF54088.1| 252|Drosophila melanogaster CG1048-PA
protein.
Length = 252
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = -1
Query: 465 NTSQDRSKSANRPRNAGALRTSLAISAQSSSRNSNTESAVCV*ISQSVTTLLT------D 304
N KS NR GAL TS+ +S+QSS + V + + T + T D
Sbjct: 93 NRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAPLRQVD 152
Query: 303 NGCKTNSSGDPSHL*YIFRLDSSPEPNIL 217
+G P + Y + + SPEP L
Sbjct: 153 HGVLEEGQITPPYQSYDYLHEFSPEPMAL 181
>AE001572-11|AAD19801.1| 252|Drosophila melanogaster
DNA-binding-protein,transcription-factor protein.
Length = 252
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = -1
Query: 465 NTSQDRSKSANRPRNAGALRTSLAISAQSSSRNSNTESAVCV*ISQSVTTLLT------D 304
N KS NR GAL TS+ +S+QSS + V + + T + T D
Sbjct: 93 NRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLRYANTNVETAPLRQVD 152
Query: 303 NGCKTNSSGDPSHL*YIFRLDSSPEPNIL 217
+G P + Y + + SPEP L
Sbjct: 153 HGVLEEGQITPPYQSYDYLHEFSPEPMAL 181
>BT001632-1|AAN71387.1| 739|Drosophila melanogaster RE38584p
protein.
Length = 739
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 16 LCSLLKAIQFQETAVFCALPEGLKLTVEEGKCVQASA-YVPADNFTE 153
LC I + + CA P GLKL V+ CV+ A P N T+
Sbjct: 596 LCLPAPRINERSPRISCACPTGLKLMVDGLMCVEDLADQRPVKNHTQ 642
>AY084162-1|AAL89900.1| 331|Drosophila melanogaster RE37150p
protein.
Length = 331
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = -1
Query: 405 TSLAISAQSSSRNSNTESAVCV*ISQSVTTLLTDNGCKTNSSGDPSHL*YIFRLDSSPEP 226
T S+ SSS +S++ S + + +V + NGC++ +G +H ++ + P
Sbjct: 267 TGSLCSSSSSSSSSSSSSTSLLAQNANVVKMRYTNGCQSVKNGSSAHYQPLYNSNKMTSP 326
Query: 225 NI 220
+
Sbjct: 327 TV 328
>AE014297-4030|AAF56644.2| 1958|Drosophila melanogaster CG5521-PA
protein.
Length = 1958
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 10 KILCSLLKAIQFQETAVFCALPEGLKLTVEEGKCVQASAYVP 135
++L LL+A+QF+ + + LKL E G+ + A VP
Sbjct: 1138 EVLQVLLQALQFKHHTIAIVAVDSLKLCAERGRQLAAIERVP 1179
>AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-PA,
isoform A protein.
Length = 1392
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = -1
Query: 405 TSLAISAQSSSRNSNTESAVCV*ISQSVTTLLTDNGCKTNSSGDPSHL*YIFRLDSSPEP 226
T S+ SSS +S++ S + + +V + NGC++ +G +H ++ + P
Sbjct: 1328 TGSLCSSSSSSSSSSSSSTSLLAQNANVVKMRYTNGCQSVKNGSSAHYQPLYNSNKMTSP 1387
Query: 225 NI 220
+
Sbjct: 1388 TV 1389
>AY119610-1|AAM50264.1| 825|Drosophila melanogaster LD34829p
protein.
Length = 825
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 195 TDLKHNINILFNIILSEIICWYVCRCLD 112
T+ + N +N + +E+ICWYV R ++
Sbjct: 612 TNREQNSTSSYNNLEAEVICWYVKRLIN 639
>AE013599-2414|AAM68495.2| 810|Drosophila melanogaster CG6967-PB,
isoform B protein.
Length = 810
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 195 TDLKHNINILFNIILSEIICWYVCRCLD 112
T+ + N +N + +E+ICWYV R ++
Sbjct: 597 TNREQNSTSSYNNLEAEVICWYVKRLIN 624
>AE013599-2413|AAF57908.2| 825|Drosophila melanogaster CG6967-PA,
isoform A protein.
Length = 825
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 195 TDLKHNINILFNIILSEIICWYVCRCLD 112
T+ + N +N + +E+ICWYV R ++
Sbjct: 612 TNREQNSTSSYNNLEAEVICWYVKRLIN 639
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,623,944
Number of Sequences: 53049
Number of extensions: 387636
Number of successful extensions: 1266
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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