Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_E01
(465 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z93374-4|CAB07556.1| 834|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 27 6.6
U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.8
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 67 ALPEGLKLTVEEGKCVQASAYVPADNFTEYNVKEDVDIMFKISIAALKN 213
++ +GL+L VE GK ++ A + A + + ++V FK+S+A + +
Sbjct: 3831 SIEDGLRLIVERGKAMENIAGLGALLAVQREIADEVLRKFKVSVATINS 3879
>Z93374-4|CAB07556.1| 834|Caenorhabditis elegans Hypothetical
protein C06C6.6 protein.
Length = 834
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 35 LYNFKRLQYFVHYLKDSN*PWKKGNVSRHLHTYQQIISLSIMLKRML 175
L + ++L F +K N WK + H H +Q+I L L ++
Sbjct: 354 LSDIEKLAKFTSEMKKLNDLWKPVTIENHYHVMRQVIELQQHLGNLM 400
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -1
Query: 369 NSNTESAVCV*ISQSVTTLLTDNGCKTNSSGDPSHL*YIFRLDSSPEPNILGILQSRYTD 190
N E A S ++++T NG +TN G+ +H +D E ++QSR +
Sbjct: 640 NQMIEDATLPFTSALASSIVTSNGSETNGHGEQAHAAQNGGIDHQKEIPKHDLMQSRSSV 699
Query: 189 LKHNINILF 163
+++ + +
Sbjct: 700 IENGAAVQY 708
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -1
Query: 369 NSNTESAVCV*ISQSVTTLLTDNGCKTNSSGDPSHL*YIFRLDSSPEPNILGILQSRYTD 190
N E A S ++++T NG +TN G+ +H +D E ++QSR +
Sbjct: 512 NQMIEDATLPFTSALASSIVTSNGSETNGHGEQAHAAQNGGIDHQKEIPKHDLMQSRSSV 571
Query: 189 LKHNINILF 163
+++ + +
Sbjct: 572 IENGAAVQY 580
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -1
Query: 369 NSNTESAVCV*ISQSVTTLLTDNGCKTNSSGDPSHL*YIFRLDSSPEPNILGILQSRYTD 190
N E A S ++++T NG +TN G+ +H +D E ++QSR +
Sbjct: 640 NQMIEDATLPFTSALASSIVTSNGSETNGHGEQAHAAQNGGIDHQKEIPKHDLMQSRSSV 699
Query: 189 LKHNINILF 163
+++ + +
Sbjct: 700 IENGAAVQY 708
>U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical
protein T04G9.6 protein.
Length = 601
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -1
Query: 198 YTDLKHNINILFNIILSEIICWYVCRCLDTFPFFHG*FESF 76
Y +L N L ILS C+YV L +F FF F +F
Sbjct: 560 YLNLTRKKNCLLISILSPKTCFYVRVLLQSFDFFCLNFNNF 600
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 393 ISAQSSSRNSNTESAVCV*ISQSVTTL-LTDNGCKTNSSGDPSHL 262
+S+ S + S + C S S +++ +T GC T+SSG H+
Sbjct: 650 VSSSSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHI 694
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 393 ISAQSSSRNSNTESAVCV*ISQSVTTL-LTDNGCKTNSSGDPSHL 262
+S+ S + S + C S S +++ +T GC T+SSG H+
Sbjct: 651 VSSSSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHI 695
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 393 ISAQSSSRNSNTESAVCV*ISQSVTTL-LTDNGCKTNSSGDPSHL 262
+S+ S + S + C S S +++ +T GC T+SSG H+
Sbjct: 651 VSSSSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHI 695
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 393 ISAQSSSRNSNTESAVCV*ISQSVTTL-LTDNGCKTNSSGDPSHL 262
+S+ S + S + C S S +++ +T GC T+SSG H+
Sbjct: 651 VSSSSPATPSISGPPPCATSSGSTSSITITTTGCSTSSSGPSKHI 695
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,100,799
Number of Sequences: 27780
Number of extensions: 197834
Number of successful extensions: 427
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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