Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_E01
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    25   0.30 
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    25   0.40 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   3.7  

>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +1

Query: 16  LCSLLKAIQFQETAVFCALPEGLKLTVEEGKCVQASAYVPADNFTE 153
           LC     I  +   + CA P+GLKL  +   CV+  +    D   E
Sbjct: 46  LCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKDSIHSIDGDEE 91


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 16  LCSLLKAIQFQETAVFCALPEGLKLTVEEGKCVQ 117
           LC     I  +   + CA P+GLKL  +   CV+
Sbjct: 46  LCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVE 79


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 192 DLKHNINILFNIILSEII 139
           +L+HN+NIL ++   +II
Sbjct: 318 ELQHNLNILVDMCEQDII 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,178
Number of Sequences: 438
Number of extensions: 2725
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)