Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D24
         (422 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125524-1|BAC86194.1| 1088|Homo sapiens protein ( Homo sapiens ...    30   2.8  
AB231766-1|BAE17138.1|  920|Homo sapiens hypothetical protein pr...    30   2.8  
BC061631-1|AAH61631.1| 1686|Homo sapiens ADAM metallopeptidase w...    29   8.5  
AY327122-1|AAQ94616.1| 1686|Homo sapiens COMPase precursor protein.    29   8.5  
AF140675-1|AAD56358.1|  997|Homo sapiens zinc metalloprotease AD...    29   8.5  

>AK125524-1|BAC86194.1| 1088|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43536 fis, clone PLACE7006051, highly  similar
           to Rattus norvegicus dynein, cytoplasmic, heavy chain 2
           (Dnch2). ).
          Length = 1088

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 160 LVLPLLFSIPTFRLGFTNRCHGLTGGA 80
           L+  L+ SI  FRL F NRC G+ G A
Sbjct: 444 LLARLVDSIKDFRLDFENRCRGIPGDA 470


>AB231766-1|BAE17138.1|  920|Homo sapiens hypothetical protein
           protein.
          Length = 920

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 160 LVLPLLFSIPTFRLGFTNRCHGLTGGA 80
           L+  L+ SI  FRL F NRC G+ G A
Sbjct: 444 LLARLVDSIKDFRLDFENRCRGIPGDA 470


>BC061631-1|AAH61631.1| 1686|Homo sapiens ADAM metallopeptidase with
           thrombospondin type 1 motif, 7 protein.
          Length = 1686

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 SGTKQNLSHVCHMNGSLIMIVKNNYVSYRASGLGYVPI 380
           SG  ++   VCH NGS    V   +    A GLGYV +
Sbjct: 680 SGAMEDRCGVCHGNGSTCHTVSGTF--EEAEGLGYVDV 715


>AY327122-1|AAQ94616.1| 1686|Homo sapiens COMPase precursor protein.
          Length = 1686

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 SGTKQNLSHVCHMNGSLIMIVKNNYVSYRASGLGYVPI 380
           SG  ++   VCH NGS    V   +    A GLGYV +
Sbjct: 680 SGAMEDRCGVCHGNGSTCHTVSGTF--EEAEGLGYVDV 715


>AF140675-1|AAD56358.1|  997|Homo sapiens zinc metalloprotease
           ADAMTS7 protein.
          Length = 997

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 SGTKQNLSHVCHMNGSLIMIVKNNYVSYRASGLGYVPI 380
           SG  ++   VCH NGS    V   +    A GLGYV +
Sbjct: 680 SGAMEDRCGVCHGNGSTCHTVSGTF--EEAEGLGYVDV 715


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,839,978
Number of Sequences: 237096
Number of extensions: 1209899
Number of successful extensions: 5873
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5873
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)