Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D23
(415 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0455 + 23792326-23792442,23793720-23794125,23794474-237945... 34 0.052
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434... 31 0.36
12_01_0086 + 690573-690998 31 0.48
01_07_0030 + 40601063-40601182,40601684-40602116,40602217-406023... 31 0.48
10_03_0018 + 7118104-7118436,7118543-7118767 30 0.84
11_01_0085 + 641579-641983 29 1.9
06_03_1037 - 27058002-27058082,27058856-27059041,27060033-270601... 29 1.9
04_04_0097 - 22782031-22782122,22782504-22782570,22782769-227828... 29 1.9
03_02_0307 - 7293150-7293488,7293877-7294248,7294640-7294690,729... 29 1.9
06_01_0778 + 5816588-5816885,5817554-5817615,5818764-5818905,581... 28 2.6
05_01_0462 - 3658153-3658290,3658394-3658540,3658622-3658720,365... 28 2.6
04_04_0754 + 27803143-27803517,27805441-27806832,27806910-278071... 28 2.6
03_02_0522 + 9103357-9103437,9103538-9103592,9103687-9103739,910... 28 2.6
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 28 2.6
01_01_0412 - 3099509-3099634,3099758-3099904,3099991-3100089,310... 28 2.6
10_01_0244 + 2549102-2549158,2549205-2549334,2549422-2549559,255... 28 3.4
06_03_0336 + 19671500-19672150,19672681-19673301 28 3.4
04_03_0372 + 15068405-15070000 28 3.4
03_05_0227 + 22133847-22133951,22134648-22135047,22135452-221355... 28 3.4
12_01_0642 + 5414964-5415410,5415535-5416677 27 4.5
12_01_0204 + 1539859-1540158 27 4.5
11_06_0321 - 22341267-22342565 27 4.5
06_03_1247 - 28676578-28676730,28677019-28677177,28677314-286774... 27 4.5
06_03_0367 - 19938941-19939324 27 4.5
06_03_0349 + 19796189-19796641 27 4.5
06_03_0343 + 19750914-19751047,19752091-19752676 27 4.5
05_07_0353 + 29497953-29499110 27 4.5
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 27 5.9
09_02_0139 - 4875234-4876210,4877532-4877932,4878056-4878135 27 5.9
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 27 5.9
08_02_1070 - 24106152-24106967 27 5.9
08_01_0324 + 2912352-2912678,2912810-2912928,2913314-2913338 27 5.9
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 27 5.9
06_03_0418 + 20581420-20583207,20583243-20583254 27 5.9
06_03_0347 + 19783824-19784348 27 5.9
06_01_0648 + 4689755-4690693 27 5.9
05_04_0172 + 18718661-18718930,18719410-18720252,18720326-187203... 27 5.9
04_04_1582 - 34590698-34591199,34593849-34594690 27 5.9
03_02_1008 - 13170630-13171481 27 5.9
03_01_0350 - 2753217-2754152 27 5.9
02_05_0619 + 30409313-30409785,30411257-30411746 27 5.9
01_06_0344 - 28576568-28576699,28576881-28576961,28577036-285771... 27 5.9
08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587... 27 7.8
08_02_0839 + 21693348-21694853 27 7.8
06_02_0066 - 11081446-11081544,11081639-11081846,11083122-110832... 27 7.8
05_04_0029 - 17321378-17321905,17323348-17323525,17323531-173239... 27 7.8
03_06_0722 - 35751490-35754357 27 7.8
03_06_0491 - 34295484-34295793,34297160-34297644 27 7.8
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 27 7.8
02_04_0311 + 21936812-21937861 27 7.8
01_06_1319 - 36267285-36267992 27 7.8
01_01_0530 - 3877337-3877396,3877709-3877837,3877954-3878221,387... 27 7.8
>11_06_0455 +
23792326-23792442,23793720-23794125,23794474-23794583,
23795063-23795125,23795478-23795504
Length = 240
Score = 33.9 bits (74), Expect = 0.052
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP-AGCGHHCQLG*PLH 224
CSH HL + +WME+ E CP G +C + LH
Sbjct: 187 CSHHFHLGCIYEWMERSEACPVCGKADYCSIHFALH 222
>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
26643948-26644120,26644227-26644308,26644623-26644758,
26644777-26644833,26644905-26645120,26645939-26646335,
26646458-26646544,26647063-26647324,26648892-26648972,
26649176-26650350
Length = 1221
Score = 31.1 bits (67), Expect = 0.36
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -2
Query: 261 SCGGCEGTSVCKCVVVTRAGSGVRTRPGTPRTAPSTCACGRGVPRASS 118
+CGG G+S V ++ AG + T PG P AP+ G G P + +
Sbjct: 1056 NCGGRPGSSRGGAVGLSAAGRMLET-PGQPHVAPNGWPAGHGHPASGT 1102
>12_01_0086 + 690573-690998
Length = 141
Score = 30.7 bits (66), Expect = 0.48
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 93 RGLYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
RG + GC+H H D + KW+ CP
Sbjct: 90 RGRWRMLPGCAHAFHKDCVVKWLRNRTTCP 119
>01_07_0030 +
40601063-40601182,40601684-40602116,40602217-40602326,
40602506-40602550
Length = 235
Score = 30.7 bits (66), Expect = 0.48
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCPAGCG 194
CSH HL + +WME+ + CP CG
Sbjct: 197 CSHHYHLSCIYEWMERSDTCPI-CG 220
>10_03_0018 + 7118104-7118436,7118543-7118767
Length = 185
Score = 29.9 bits (64), Expect = 0.84
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +3
Query: 231 THWYLHNLRNLLLPTEY-IPVLFP 299
T WY+HNLR P ++ IPV +P
Sbjct: 71 TCWYVHNLRRYEFPLQFDIPVAYP 94
>11_01_0085 + 641579-641983
Length = 134
Score = 28.7 bits (61), Expect = 1.9
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 93 RGLYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
RG GC+H H D + KW+ CP
Sbjct: 87 RGRGRMLPGCAHAFHKDCVVKWLRNRTTCP 116
>06_03_1037 -
27058002-27058082,27058856-27059041,27060033-27060176,
27060284-27061183
Length = 436
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -2
Query: 207 AGSGVRTRPGTPRTAPSTCACGRGVPRASSP 115
A S P PRT PS A GRGVPR P
Sbjct: 126 ASSSEPPPPPPPRTLPSAGA-GRGVPRMQQP 155
>04_04_0097 -
22782031-22782122,22782504-22782570,22782769-22782861,
22782981-22783034,22783163-22783214,22783346-22783413,
22783532-22783711,22783843-22783935,22784585-22784665,
22785011-22785091,22785204-22785331,22786502-22786643
Length = 376
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 224 HLHTLVPSQPPQLIITHRVYTSVISNGQRFQSLAEEID 337
H+H L+P Q ++H++ + +S GQRF + +D
Sbjct: 222 HVHDLLPFQKDSFNVSHKI--NKLSFGQRFPGVVNPLD 257
>03_02_0307 -
7293150-7293488,7293877-7294248,7294640-7294690,
7295293-7295365,7295931-7296166
Length = 356
Score = 28.7 bits (61), Expect = 1.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 96 GLYAWCQGCSHGGHLDHMRKWMEQ 167
GL +WC+G S G H D + ++ Q
Sbjct: 76 GLISWCKGASIGWHSDDNKPYLRQ 99
>06_01_0778 +
5816588-5816885,5817554-5817615,5818764-5818905,
5819969-5820064,5820147-5820266,5820401-5820663,
5821507-5821617
Length = 363
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 273 WVIISCGGCEGTSVCKCVVVTRAGSGVRTRPGTPRTAPSTCACG 142
W +S G E TS C+ + A + P PR ST ACG
Sbjct: 35 WRPVSAGHQEPTSACRQELAAAAAAAALPVPPVPR-GSSTGACG 77
>05_01_0462 -
3658153-3658290,3658394-3658540,3658622-3658720,
3658802-3659253,3659597-3660280,3662072-3662180
Length = 542
Score = 28.3 bits (60), Expect = 2.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C HG H + ++KW++ CP
Sbjct: 511 CGHGFHCNCIKKWLQVKNTCP 531
>04_04_0754 +
27803143-27803517,27805441-27806832,27806910-27807164,
27807246-27807368,27807643-27808119,27808217-27808603
Length = 1002
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 245 SQPPQLIITHRVYTSVISNGQRFQSLAEEIDLTLSYSTCYFYSLICLLKA 394
S P Q +I R YT S + + + L +T YFYS+ +L+A
Sbjct: 366 STPVQFVIGRRFYTGAYKALSHGSSNMDVL-IALGTNTAYFYSVYSILRA 414
>03_02_0522 +
9103357-9103437,9103538-9103592,9103687-9103739,
9103832-9104060,9104149-9104284,9104448-9104496,
9105123-9105248,9106003-9106110,9106255-9106395
Length = 325
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 69 CSVC-HTVVRGLYAWCQGCSHGGHLDHMRKWMEQYEVCPAGCGHHCQLG 212
CSVC VV G C H H + + W+ Q CP C H G
Sbjct: 222 CSVCLEQVVVGDLLRSLPCLHQFHANCIDPWLRQQGTCPV-CKHRVSDG 269
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 113 PGLLARGTPRPHAQVDGAVRGVPGRVRTPLP 205
P + A G PRP QV+ AV PG+ P P
Sbjct: 107 PQMAAAGAPRP--QVNAAVSPAPGQAGAPQP 135
>01_01_0412 -
3099509-3099634,3099758-3099904,3099991-3100089,
3100171-3100602,3101121-3101599,3101683-3101728
Length = 442
Score = 28.3 bits (60), Expect = 2.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C+H H D ++KW+++ CP
Sbjct: 415 CNHDFHTDCVKKWLKEKNSCP 435
>10_01_0244 +
2549102-2549158,2549205-2549334,2549422-2549559,
2550078-2550205,2550346-2550396
Length = 167
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C H HL + +WME+ E CP
Sbjct: 127 CEHHFHLCCILEWMERSETCP 147
>06_03_0336 + 19671500-19672150,19672681-19673301
Length = 423
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 66 LCSVC-HTVVRG-LYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
LC+VC VV G C H H+D + W+ + CP
Sbjct: 147 LCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCP 187
>04_03_0372 + 15068405-15070000
Length = 531
Score = 27.9 bits (59), Expect = 3.4
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +2
Query: 86 GGARAVRVVPGLLA--RGTPRPHAQVDGAVRGVPGRVRTPLPARVTTTHLHTLVPSQPPQ 259
GG + +V LL R T R H G G P T LPA + T++P +
Sbjct: 200 GGDHGITLVYVLLVERRVTARVHVLDSGGAWGAPTTAETELPAPSCDDAVETVLPPINGE 259
Query: 260 L-IITHRVYTSVISNGQRFQSLAEEIDLTLS 349
+ ++T YT + G S+ E D S
Sbjct: 260 VYVVTTSGYTLGLRLGTTRFSVVELPDAARS 290
>03_05_0227 +
22133847-22133951,22134648-22135047,22135452-22135561,
22135869-22135955
Length = 233
Score = 27.9 bits (59), Expect = 3.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C+H HL + +WME+ + CP
Sbjct: 181 CNHNFHLCCIYEWMERSQACP 201
>12_01_0642 + 5414964-5415410,5415535-5416677
Length = 529
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 136 CPPCEQPWHHAYSPRTT 86
CP C PW A SP TT
Sbjct: 42 CPVCATPWRDAPSPLTT 58
>12_01_0204 + 1539859-1540158
Length = 99
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 89 GARA-VRVVPGLLARGTPRPHAQVDGAVR 172
GARA R GL ARG P VDGA R
Sbjct: 68 GARARARCCQGLKARGAEAPCHDVDGATR 96
>11_06_0321 - 22341267-22342565
Length = 432
Score = 27.5 bits (58), Expect = 4.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 178 HTSYCSIHLRMWSRCPPCEQPW 113
H YCS ++ W PC Q W
Sbjct: 145 HMIYCSCNVLEWDGFDPCRQRW 166
>06_03_1247 -
28676578-28676730,28677019-28677177,28677314-28677412,
28677504-28677554,28677712-28678983,28680209-28680412,
28682330-28682439,28684962-28685067
Length = 717
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 69 CSVCHT-VVRGLYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
CS+C + G C H H+ + +W+ Q CP
Sbjct: 663 CSICQEEYIEGEEVGRMQCEHQYHVSCIHEWLRQKNWCP 701
>06_03_0367 - 19938941-19939324
Length = 127
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 69 CSVCHTVVRG--LYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
C+VC VR + C H H D + +W+ + CP
Sbjct: 70 CAVCLGAVREGEMVRRLPACEHVYHADCIDRWLAAHRTCP 109
>06_03_0349 + 19796189-19796641
Length = 150
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 69 CSVCHTVVR--GLYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
C+VC V+ + C+H H+D + W+ + CP
Sbjct: 86 CAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCP 125
>06_03_0343 + 19750914-19751047,19752091-19752676
Length = 239
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +3
Query: 69 CSVCHTVVRG--LYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
C+VC VR + C H H D + +W+ + CP
Sbjct: 182 CAVCLGAVREGEMVRRLPACEHVYHADCIDRWLAAHRTCP 221
>05_07_0353 + 29497953-29499110
Length = 385
Score = 27.5 bits (58), Expect = 4.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C H HLD + +W+E CP
Sbjct: 143 CRHAFHLDCVDRWLESKASCP 163
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 164 AVRGVPGRVRTPLPA-RVTTTHLHTLVPSQPPQLIITHRVY 283
A R +P + LP+ R T TH HT P P TH Y
Sbjct: 537 AQRQIPTSLDDFLPSIRTTCTHTHTCNPPGPSATEHTHTCY 577
>09_02_0139 - 4875234-4876210,4877532-4877932,4878056-4878135
Length = 485
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = -2
Query: 306 CPLEITLVYTLWVIISCGGCEGTSVCKCVVVTRAGSGVRTRPGTPRTAPSTCA 148
C L + V GGC G S C V+ A GV R + CA
Sbjct: 205 CGLRRCAIRLAGVACVLGGCAGASTGACAVLGGAAVGVPLRRAPEVSCAHACA 257
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 201 SGVRTRPGTPRTAPSTCACGRGVPRAS 121
SG+ RP PR +PS R V RA+
Sbjct: 16 SGISARPVAPRPSPSRARAPRSVVRAA 42
>08_02_1070 - 24106152-24106967
Length = 271
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 69 CSVCHT-VVRGLYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
C+VC V G CSHG H + + W++ CP
Sbjct: 209 CAVCRDGVAAGERVKRLPCSHGYHEECIMPWLDVRNSCP 247
>08_01_0324 + 2912352-2912678,2912810-2912928,2913314-2913338
Length = 156
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 217 GHPSWQWCPHPAGHTSYCSIH 155
G SW+W PHP S +H
Sbjct: 136 GEFSWRWTPHPLSSISVSVLH 156
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 27.1 bits (57), Expect = 5.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C HG H++ + W++ + CP
Sbjct: 136 CRHGFHVECVDTWLDAHSTCP 156
>06_03_0418 + 20581420-20583207,20583243-20583254
Length = 599
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/54 (29%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = -2
Query: 261 SCGGCEGTSVCKCVVVTRAGSGVRTRP--GTPRTAPSTCACGRGVPRASSPGTT 106
S G C G C C + R RP G P +C RG+ P T
Sbjct: 327 SYGICSGAGNCSCPSEIHSSPIYRDRPGLGCKLATPISCRDVRGIEMVELPNVT 380
>06_03_0347 + 19783824-19784348
Length = 174
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 69 CSVCHTVVRGLYAWCQ--GCSHGGHLDHMRKWMEQYEVCP 182
CSVC V+G A + C H H++ + W+ + CP
Sbjct: 102 CSVCLGAVQGGEAVRRLPACKHLYHVECIDMWLASHATCP 141
>06_01_0648 + 4689755-4690693
Length = 312
Score = 27.1 bits (57), Expect = 5.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C HG H++ + W ++ CP
Sbjct: 122 CDHGFHVECIDMWFHSHDTCP 142
>05_04_0172 +
18718661-18718930,18719410-18720252,18720326-18720354,
18720439-18720529,18720625-18720779,18721552-18721662,
18722579-18722645
Length = 521
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQ-YEVCPAGCGHHCQ 206
C+H HL + KW+++ + VCP G C+
Sbjct: 482 CNHEFHLTCVDKWLKEIHRVCPLCRGDVCR 511
>04_04_1582 - 34590698-34591199,34593849-34594690
Length = 447
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -2
Query: 225 CVVVTRAGSGVRTRPGT---PRTAPSTCACGRGVPRASSP 115
C++ R GS RP T P + P+T A + +PR +SP
Sbjct: 9 CLLPPRGGS--LARPDTALPPASQPATVAVNQNIPRLASP 46
>03_02_1008 - 13170630-13171481
Length = 283
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 69 CSVCHTVVR-GLYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
C VC G A C H H D + W+EQ+ CP
Sbjct: 187 CPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCP 225
>03_01_0350 - 2753217-2754152
Length = 311
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 69 CSVCHT--VVRGLYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
C+VC + V R CSH H+D + W++ CP
Sbjct: 128 CAVCLSEFVERERVRLLPNCSHAFHIDCIDTWLQGNARCP 167
>02_05_0619 + 30409313-30409785,30411257-30411746
Length = 320
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C HG H + W+ Q VCP
Sbjct: 98 CEHGFHARCVDSWLRQSRVCP 118
>01_06_0344 -
28576568-28576699,28576881-28576961,28577036-28577131,
28578862-28579038,28579633-28580130
Length = 327
Score = 27.1 bits (57), Expect = 5.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C H H+ +++W+ Q VCP
Sbjct: 298 CGHSYHVYCIKQWLSQKNVCP 318
>08_02_1091 +
24256025-24256190,24256806-24257978,24258066-24258733,
24258994-24260065,24260241-24260563,24260647-24260835,
24261400-24261506,24262103-24262163,24262617-24262634
Length = 1258
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 107 VVPGLLARGTPRPHAQVDGAVRGVPGRVRTPLPARVT 217
V+ LL T +P V+ ++G+P V +PLP ++T
Sbjct: 147 VMSSLLQEDTSQP---VESNLQGIPHSVSSPLPEQIT 180
>08_02_0839 + 21693348-21694853
Length = 501
Score = 26.6 bits (56), Expect = 7.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
CSH H+D + W+ + CP
Sbjct: 172 CSHAFHVDCIDTWLLSHSTCP 192
>06_02_0066 -
11081446-11081544,11081639-11081846,11083122-11083257,
11083339-11083541,11083616-11083765,11083848-11083964,
11084623-11085119
Length = 469
Score = 26.6 bits (56), Expect = 7.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
C H H+ +R W+E+ CP
Sbjct: 275 CGHLFHVHCLRSWLERQHTCP 295
>05_04_0029 -
17321378-17321905,17323348-17323525,17323531-17323910,
17323936-17324052
Length = 400
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 255 RNLLLPTEYIPVLFPTDNVS 314
+ LLLPT+ LFPTD VS
Sbjct: 3 QQLLLPTDMEQQLFPTDGVS 22
>03_06_0722 - 35751490-35754357
Length = 955
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 104 RVVPGLLARGTPRPHAQVDGAVRG-VPGRVRTPLPARVTT 220
R +PG L R P P A R +PG +P PA TT
Sbjct: 139 RPLPGSLMRAPPPPPPPTAEAPRQRLPGAAASPAPATNTT 178
>03_06_0491 - 34295484-34295793,34297160-34297644
Length = 264
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 223 CSGHPSWQWCPHPAGHTSYCSIHLRMWSRCPP 128
C P W+WC HP SI + + CPP
Sbjct: 93 CVNQPGWEWC-HPGSP----SILITATNFCPP 119
>03_05_0488 -
24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 183 PGTPRTAPSTCACGRGVPRASSPGTT 106
PGTP AP+ A G PR +PG T
Sbjct: 49 PGTPTVAPAPAAAGATGPR-PAPGYT 73
>02_04_0311 + 21936812-21937861
Length = 349
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 120 CSHGGHLDHMRKWMEQYEVCP 182
CSH H D + W+E + CP
Sbjct: 142 CSHAFHPDCIDPWLEGHVTCP 162
>01_06_1319 - 36267285-36267992
Length = 235
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 69 CSVC-HTVVRGLYAWCQGCSHGGHLDHMRKWMEQYEVCP 182
C+VC + G A C H H + W+E ++ CP
Sbjct: 89 CAVCLDDLEPGGSAVVTPCDHAYHPQCIAPWLEAHDTCP 127
>01_01_0530 -
3877337-3877396,3877709-3877837,3877954-3878221,
3878385-3878776,3879003-3879119,3879209-3879304,
3879775-3879948,3880077-3880243,3880800-3880965,
3881040-3881178,3881767-3881901,3882157-3882161
Length = 615
Score = 26.6 bits (56), Expect = 7.8
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Frame = +2
Query: 110 VPGLLARGTPRPHAQVDGAVRGVPGRVRTPLPARVTTTHLHTLVP---SQPPQLIITHRV 280
VP ++ T +A GVP R+ +PLP ++ H T+ S PP I +
Sbjct: 160 VPLMVIVWTALSYALPKDVPSGVPRRLFSPLPWESSSLHHWTIAKDLFSVPPAYIFAAIL 219
Query: 281 YTSVISNGQRF-----QSLAEEIDLTLSYSTCYFYSLICL 385
+I+ F LA++ + L + Y Y ++ L
Sbjct: 220 PALMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILVL 259
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,543,151
Number of Sequences: 37544
Number of extensions: 277564
Number of successful extensions: 1259
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -