Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D23
(415 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 2.4
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 22 2.4
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 3.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 4.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 7.3
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 7.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 7.3
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 7.3
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 7.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 20 9.6
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 216 PLHTYTHWYLHNLRNLL 266
P+HT+ H +L LRN L
Sbjct: 538 PIHTWIHPWLPLLRNRL 554
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 22.2 bits (45), Expect = 2.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 237 WYLHNLRNLLLPTEYIPVLFPTDN 308
W+LH ++N++ +Y VL TD+
Sbjct: 279 WFLHKMKNII---DYYLVLENTDH 299
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.8 bits (44), Expect = 3.2
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +3
Query: 63 DLCSVCHTVVRGLYAWCQGCSHGGH 137
D CS ++ +G ++C GC H
Sbjct: 20 DKCSGYPSIRQGTTSYCLGCGDSCH 44
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 4.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 286 QCYFQRTTFPIISRRNRSHSFI*YMLFLFINL 381
QC F T F I S + + M+FL+ N+
Sbjct: 335 QCLFYNTDFIIYSSLSSFYIPCIIMVFLYYNI 366
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/22 (31%), Positives = 9/22 (40%)
Frame = +2
Query: 197 PLPARVTTTHLHTLVPSQPPQL 262
P P R T LH P ++
Sbjct: 419 PFPRRATLAQLHNFTTMTPQEI 440
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 7.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 291 TLVYTLWVIISCGGCEGTSVCKCVVVTRAGSGV 193
TL YT+ +II C G +V + + +G V
Sbjct: 244 TLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKV 276
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 7.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 291 TLVYTLWVIISCGGCEGTSVCKCVVVTRAGSGV 193
TL YT+ +II C G +V + + +G V
Sbjct: 244 TLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKV 276
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 20.6 bits (41), Expect = 7.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 291 TLVYTLWVIISCGGCEGTSVCKCVVVTRAGSGV 193
TL YT+ +II C G SV + + +G V
Sbjct: 236 TLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKV 268
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 365 FYSLICLLKAHVILVTF 415
++S++C KAH L F
Sbjct: 11 YFSIVCQAKAHYSLRDF 27
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 20.6 bits (41), Expect = 7.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 179 PGRVRTPLPARVTTTHLHTLVPSQPP 256
PGR++T + THL L + P
Sbjct: 398 PGRLQTKPEGFMIPTHLKVLTIEEKP 423
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 20.2 bits (40), Expect = 9.6
Identities = 7/18 (38%), Positives = 8/18 (44%)
Frame = -1
Query: 148 MWSRCPPCEQPWHHAYSP 95
MW C Q + H Y P
Sbjct: 415 MWLSCSSFFQQFFHCYCP 432
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,131
Number of Sequences: 438
Number of extensions: 2893
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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