Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D22
(517 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 59 1e-08
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 59 1e-08
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 59 1e-08
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 59 1e-08
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 59 1e-08
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 59 1e-08
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 59 1e-08
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 35 0.15
L08238-1|AAA59592.1| 394|Homo sapiens MG44 protein. 30 5.5
Z85986-2|CAI19118.1| 348|Homo sapiens potassium channel tetrame... 29 9.7
AY305862-1|AAP74385.1| 419|Homo sapiens K+ channel tetramerizat... 29 9.7
AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP respons... 29 9.7
AL136135-1|CAH72192.1| 348|Homo sapiens potassium channel tetra... 29 9.7
AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B p... 29 9.7
AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A pr... 29 9.7
AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein pr... 29 9.7
AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-... 29 9.7
AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein. 29 9.7
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 58.8 bits (136), Expect = 1e-08
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +3
Query: 105 GHTYHLGACPIVEPMPGFEMHRLLGIWYVIQKTSTA---SNCITYNFTRTNEPGKYNLEQ 275
G +HLG CP F++++ LG WY I+K T CI N++ E GK ++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS-LMENGK--IKV 76
Query: 276 LSQHFILGLTPLKHDYRYSGVLTVPDPAVPAQMRVRFPLSVAGSASYTVLATDYLSYAAV 455
L+Q T + G T + PA++ V+F + SA Y +LATDY +YA V
Sbjct: 77 LNQELRADGTV----NQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALV 131
Query: 456 FTCQKLAYA-HRRSATILSR 512
++C + H A IL+R
Sbjct: 132 YSCTCIIQLFHVDFAWILAR 151
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 58.8 bits (136), Expect = 1e-08
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +3
Query: 105 GHTYHLGACPIVEPMPGFEMHRLLGIWYVIQKTSTA---SNCITYNFTRTNEPGKYNLEQ 275
G +HLG CP F++++ LG WY I+K T CI N++ E GK ++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS-LMENGK--IKV 76
Query: 276 LSQHFILGLTPLKHDYRYSGVLTVPDPAVPAQMRVRFPLSVAGSASYTVLATDYLSYAAV 455
L+Q T + G T + PA++ V+F + SA Y +LATDY +YA V
Sbjct: 77 LNQELRADGTV----NQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALV 131
Query: 456 FTCQKLAYA-HRRSATILSR 512
++C + H A IL+R
Sbjct: 132 YSCTCIIQLFHVDFAWILAR 151
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 58.8 bits (136), Expect = 1e-08
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +3
Query: 105 GHTYHLGACPIVEPMPGFEMHRLLGIWYVIQKTSTA---SNCITYNFTRTNEPGKYNLEQ 275
G +HLG CP F++++ LG WY I+K T CI N++ E GK ++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS-LMENGK--IKV 76
Query: 276 LSQHFILGLTPLKHDYRYSGVLTVPDPAVPAQMRVRFPLSVAGSASYTVLATDYLSYAAV 455
L+Q T + G T + PA++ V+F + SA Y +LATDY +YA V
Sbjct: 77 LNQELRADGTV----NQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALV 131
Query: 456 FTCQKLAYA-HRRSATILSR 512
++C + H A IL+R
Sbjct: 132 YSCTCIIQLFHVDFAWILAR 151
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 58.8 bits (136), Expect = 1e-08
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +3
Query: 105 GHTYHLGACPIVEPMPGFEMHRLLGIWYVIQKTSTA---SNCITYNFTRTNEPGKYNLEQ 275
G +HLG CP F++++ LG WY I+K T CI N++ E GK ++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS-LMENGK--IKV 76
Query: 276 LSQHFILGLTPLKHDYRYSGVLTVPDPAVPAQMRVRFPLSVAGSASYTVLATDYLSYAAV 455
L+Q T + G T + PA++ V+F + SA Y +LATDY +YA V
Sbjct: 77 LNQELRADGTV----NQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALV 131
Query: 456 FTCQKLAYA-HRRSATILSR 512
++C + H A IL+R
Sbjct: 132 YSCTCIIQLFHVDFAWILAR 151
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 58.8 bits (136), Expect = 1e-08
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +3
Query: 105 GHTYHLGACPIVEPMPGFEMHRLLGIWYVIQKTSTA---SNCITYNFTRTNEPGKYNLEQ 275
G +HLG CP F++++ LG WY I+K T CI N++ E GK ++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS-LMENGK--IKV 76
Query: 276 LSQHFILGLTPLKHDYRYSGVLTVPDPAVPAQMRVRFPLSVAGSASYTVLATDYLSYAAV 455
L+Q T + G T + PA++ V+F + SA Y +LATDY +YA V
Sbjct: 77 LNQELRADGTV----NQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALV 131
Query: 456 FTCQKLAYA-HRRSATILSR 512
++C + H A IL+R
Sbjct: 132 YSCTCIIQLFHVDFAWILAR 151
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 58.8 bits (136), Expect = 1e-08
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +3
Query: 105 GHTYHLGACPIVEPMPGFEMHRLLGIWYVIQKTSTA---SNCITYNFTRTNEPGKYNLEQ 275
G +HLG CP F++++ LG WY I+K T CI N++ E GK ++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS-LMENGK--IKV 76
Query: 276 LSQHFILGLTPLKHDYRYSGVLTVPDPAVPAQMRVRFPLSVAGSASYTVLATDYLSYAAV 455
L+Q T + G T + PA++ V+F + SA Y +LATDY +YA V
Sbjct: 77 LNQELRADGTV----NQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALV 131
Query: 456 FTCQKLAYA-HRRSATILSR 512
++C + H A IL+R
Sbjct: 132 YSCTCIIQLFHVDFAWILAR 151
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 58.8 bits (136), Expect = 1e-08
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +3
Query: 105 GHTYHLGACPIVEPMPGFEMHRLLGIWYVIQKTSTA---SNCITYNFTRTNEPGKYNLEQ 275
G +HLG CP F++++ LG WY I+K T CI N++ E GK ++
Sbjct: 20 GQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGRCIQANYS-LMENGK--IKV 76
Query: 276 LSQHFILGLTPLKHDYRYSGVLTVPDPAVPAQMRVRFPLSVAGSASYTVLATDYLSYAAV 455
L+Q T + G T + PA++ V+F + SA Y +LATDY +YA V
Sbjct: 77 LNQELRADGTV----NQIEGEATPVNLTEPAKLEVKFSWFMP-SAPYWILATDYENYALV 131
Query: 456 FTCQKLAYA-HRRSATILSR 512
++C + H A IL+R
Sbjct: 132 YSCTCIIQLFHVDFAWILAR 151
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 35.1 bits (77), Expect = 0.15
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 363 PAQMRVRFPLSVAGSASYTVLATDYLSYAAVFTCQKLAYA-HRRSATILSR 512
PA++ V+F + SA Y +LATDY +YA V++C + H A IL+R
Sbjct: 11 PAKLEVKFSWFMP-SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILAR 60
>L08238-1|AAA59592.1| 394|Homo sapiens MG44 protein.
Length = 394
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 141 PQWGTLPGGMYAHKRLHRHLTAQLEALVCTF 49
P+ G LPG M RL HL A E+ VC +
Sbjct: 36 PRTGILPGEMAWISRLREHLGATAESQVCAY 66
>Z85986-2|CAI19118.1| 348|Homo sapiens potassium channel
tetramerisation domain containing 20 protein.
Length = 348
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 228 YNFTRTNEPGKYNLEQLSQHFILGLTPLKHDYRYSGVLTVPD 353
YNFTR NE G+Y + + + T L DY +G++ PD
Sbjct: 82 YNFTRPNEKGEYEIAEGISATVF-RTVL--DYYKTGIINCPD 120
>AY305862-1|AAP74385.1| 419|Homo sapiens K+ channel tetramerization
protein protein.
Length = 419
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 228 YNFTRTNEPGKYNLEQLSQHFILGLTPLKHDYRYSGVLTVPD 353
YNFTR NE G+Y + + + T L DY +G++ PD
Sbjct: 153 YNFTRPNEKGEYEIAEGISATVF-RTVL--DYYKTGIINCPD 191
>AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP response
element binding and betadogene protein.
Length = 2295
Score = 29.1 bits (62), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 123 PGGMYAHKRLHRHLTAQLEALVC 55
PG MY H ++HR + L A+ C
Sbjct: 195 PGTMYQHIKMHRRILGHLSAVYC 217
>AL136135-1|CAH72192.1| 348|Homo sapiens potassium channel
tetramerisation domain containing 20 protein.
Length = 348
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 228 YNFTRTNEPGKYNLEQLSQHFILGLTPLKHDYRYSGVLTVPD 353
YNFTR NE G+Y + + + T L DY +G++ PD
Sbjct: 82 YNFTRPNEKGEYEIAEGISATVF-RTVL--DYYKTGIINCPD 120
>AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B
protein.
Length = 2269
Score = 29.1 bits (62), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 123 PGGMYAHKRLHRHLTAQLEALVC 55
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
>AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A
protein.
Length = 2320
Score = 29.1 bits (62), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 123 PGGMYAHKRLHRHLTAQLEALVC 55
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
>AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein
protein.
Length = 2269
Score = 29.1 bits (62), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 123 PGGMYAHKRLHRHLTAQLEALVC 55
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
>AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein
WDR9-form2 protein.
Length = 2199
Score = 29.1 bits (62), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 123 PGGMYAHKRLHRHLTAQLEALVC 55
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
>AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein.
Length = 2269
Score = 29.1 bits (62), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 123 PGGMYAHKRLHRHLTAQLEALVC 55
PG MY H ++HR + L A+ C
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYC 191
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,392,069
Number of Sequences: 237096
Number of extensions: 1641214
Number of successful extensions: 3393
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3386
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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