Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D19
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   2.4  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   4.2  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   5.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   5.6  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           22   9.8  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    22   9.8  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 398 SRPPQWAARLTPRVHS 351
           SR  +WA RL P VHS
Sbjct: 894 SRYARWAHRLIPEVHS 909


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 391 GRLFVNVNGMRAISRRQRTQVPVGR 465
           GRLF++ NG  +  R  ++  P G+
Sbjct: 329 GRLFISNNGRVSCCRCMKSSTPFGK 353


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +2

Query: 23  PKNNTITSFYIFAKVRDTKVLEAVF--CRRGF 112
           PK+NT+  F I A+V  T   + ++  C++ F
Sbjct: 550 PKSNTLNKFTILARVLRTMHYQDIYDVCQKLF 581


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +2

Query: 23  PKNNTITSFYIFAKVRDTKVLEAVF--CRRGF 112
           PK+NT+  F I A+V  T   + ++  C++ F
Sbjct: 550 PKSNTLNKFTILARVLRTMHYQDIYDVCQKLF 581


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 51  TFLRK*ETQKYWKQCSVDEDSLYYKR 128
           ++L K +T   W   SV E +L++KR
Sbjct: 541 SYLLKTKTYIKWPTKSVHEQALFWKR 566


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 168 TIPFFELFIRTNFISETYH 224
           T P+F+  +R  F+  T H
Sbjct: 587 TPPYFQALLRNYFVGRTLH 605


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,406
Number of Sequences: 2352
Number of extensions: 6169
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)