Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D19
         (489 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022083-1|AAY33499.1|  531|Drosophila melanogaster RH39704p pro...    67   1e-11
AY089497-1|AAL90235.1|  531|Drosophila melanogaster GH09868p pro...    67   1e-11
AE013599-3707|AAF47080.2|  332|Drosophila melanogaster CG10327-P...    67   1e-11
AE013599-3706|AAM68274.1|  531|Drosophila melanogaster CG10327-P...    67   1e-11
AE013599-3705|AAF47078.2|  531|Drosophila melanogaster CG10327-P...    67   1e-11
AE013599-3704|AAF47079.2|  531|Drosophila melanogaster CG10327-P...    67   1e-11
AB019707-1|BAA34430.1|  332|Drosophila melanogaster TAR-binding ...    66   3e-11
AB019706-1|BAA34429.1|  531|Drosophila melanogaster TAR-binding ...    66   3e-11
AB019705-1|BAA34428.1|  531|Drosophila melanogaster TAR-binding ...    66   3e-11
AB010261-8|BAA34422.1|  332|Drosophila melanogaster TAR-binding ...    66   3e-11
AB010261-7|BAA34421.1|  531|Drosophila melanogaster TAR-binding ...    66   3e-11
AY118452-1|AAM49821.1|  318|Drosophila melanogaster AT09813p pro...    61   7e-10
AE014296-2502|AAF49643.2|  318|Drosophila melanogaster CG7804-PA...    61   7e-10

>BT022083-1|AAY33499.1|  531|Drosophila melanogaster RH39704p
           protein.
          Length = 531

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 31/53 (58%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E IELP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AY089497-1|AAL90235.1|  531|Drosophila melanogaster GH09868p
           protein.
          Length = 531

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 31/53 (58%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E IELP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AE013599-3707|AAF47080.2|  332|Drosophila melanogaster CG10327-PA,
           isoform A protein.
          Length = 332

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 31/53 (58%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E IELP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AE013599-3706|AAM68274.1|  531|Drosophila melanogaster CG10327-PD,
           isoform D protein.
          Length = 531

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 31/53 (58%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E IELP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AE013599-3705|AAF47078.2|  531|Drosophila melanogaster CG10327-PC,
           isoform C protein.
          Length = 531

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 31/53 (58%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E IELP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AE013599-3704|AAF47079.2|  531|Drosophila melanogaster CG10327-PB,
           isoform B protein.
          Length = 531

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 31/53 (58%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E IELP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AB019707-1|BAA34430.1|  332|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 332

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E I+LP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIQLPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AB019706-1|BAA34429.1|  531|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 531

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E I+LP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIQLPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AB019705-1|BAA34428.1|  531|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 531

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E I+LP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIQLPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AB010261-8|BAA34422.1|  332|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 332

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E I+LP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIQLPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AB010261-7|BAA34421.1|  531|Drosophila melanogaster TAR-binding
           protein protein.
          Length = 531

 Score = 65.7 bits (153), Expect = 3e-11
 Identities = 30/53 (56%), Positives = 42/53 (79%)
 Frame = +2

Query: 329 IEYVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +++VQVSE E +E I+LP EEDG+LL+ST+ AQFPG+ GLKYR+     +RG+
Sbjct: 1   MDFVQVSEEEGDEPIQLPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGV 53


>AY118452-1|AAM49821.1|  318|Drosophila melanogaster AT09813p
           protein.
          Length = 318

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 29/51 (56%), Positives = 39/51 (76%)
 Frame = +2

Query: 335 YVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +V VSE E +E IELP EEDG+LL+ST+ AQFP +SGL+YR+     +RG+
Sbjct: 3   FVHVSEKEGDEPIELPAEEDGTLLLSTLQAQFPESSGLQYRNVDTKAVRGV 53


>AE014296-2502|AAF49643.2|  318|Drosophila melanogaster CG7804-PA
           protein.
          Length = 318

 Score = 61.3 bits (142), Expect = 7e-10
 Identities = 29/51 (56%), Positives = 39/51 (76%)
 Frame = +2

Query: 335 YVQVSESEHEESIELPTEEDGSLLMSTVCAQFPGASGLKYRSDGGGRLRGL 487
           +V VSE E +E IELP EEDG+LL+ST+ AQFP +SGL+YR+     +RG+
Sbjct: 3   FVHVSEKEGDEPIELPAEEDGTLLLSTLQAQFPESSGLQYRNVDTKAVRGV 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,764,560
Number of Sequences: 53049
Number of extensions: 275500
Number of successful extensions: 540
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)