Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D18
         (353 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    26   0.11 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   0.81 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   1.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   2.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.3  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      21   4.3  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   9.9  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   9.9  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 26.2 bits (55), Expect = 0.11
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 15  MNGTFETSNNVVGFIKCVPLTVSLSLY*NISLLFV 119
           MNGT    N++VGF+K  PL  ++ +   +  +++
Sbjct: 13  MNGTKSEINDIVGFLKKGPLDSNVEVVVGVPSIYL 47


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.4 bits (48), Expect = 0.81
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 27  FETSNNVVGFIKCVPLTVSLSLY*NISLLF 116
           F T NNV   I  + +T+SLS    I+ LF
Sbjct: 869 FGTGNNVALRITSMSVTISLSASVTIACLF 898


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 336 TSRGPQPPRHTDQPLQHHS 280
           +SR P P   T QP Q H+
Sbjct: 40  SSRSPSPSLLTSQPHQDHN 58


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 72  LTVSLSLY*NISLLFVNVTNLTYLKKEGFN*RIRIVNNPGDNVVILYV 215
           + VS  LY   + L ++  NLT  K E  +  + +V+NP     ++Y+
Sbjct: 277 MMVSPRLYDRQNGLVLSRMNLTLAKMEKTSKPLPMVDNPESTGNLVYI 324


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 242 HCNIYIVMDGIG*LWCCSGWSVCRGGC 322
           HC   I     G ++ C GW    G C
Sbjct: 595 HCAEEIGRGQYGIVFACDGWGGKAGPC 621


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +2

Query: 242 HCNIYIVMDGIG*LWCCSGWSVCRGGC 322
           HC   I     G ++ C GW    G C
Sbjct: 633 HCAEEIGRGQYGIVFACDGWGGKAGPC 659


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = -3

Query: 318 PPRHTDQPL-QHHSH 277
           PP H D P+ Q H H
Sbjct: 61  PPEHRDLPIYQSHHH 75


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 305 PTSHYSTIVTLCH 267
           PT++YS   TL H
Sbjct: 185 PTANYSASTTLSH 197


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 3   TRVIMNGTFETSNNVVGFIKCVPLTVS 83
           ++V  NG  E ++ +   IKC PL ++
Sbjct: 222 SKVEGNGVHEENSPLEDNIKCEPLELT 248


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,193
Number of Sequences: 438
Number of extensions: 1476
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)