Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D17
         (211 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    85   1e-17
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    85   1e-17
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    85   1e-17
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    81   2e-16
AY061562-1|AAL29110.1|  249|Drosophila melanogaster LP11415p pro...    31   0.22 
AE014298-1718|AAF48118.1|  249|Drosophila melanogaster CG2471-PA...    31   0.22 

>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score = 85.4 bits (202), Expect = 1e-17
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVNVEPYWPGL 209
           M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V VEPYWPGL
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGL 46


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score = 85.4 bits (202), Expect = 1e-17
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVNVEPYWPGL 209
           M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V VEPYWPGL
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGL 46


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score = 85.4 bits (202), Expect = 1e-17
 Identities = 39/46 (84%), Positives = 44/46 (95%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVNVEPYWPGL 209
           M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V VEPYWPGL
Sbjct: 1   MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGL 46


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 81.4 bits (192), Expect = 2e-16
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = +3

Query: 72  MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVNVEPYWPGL 209
           M++KAELA VY++LILVDDDVAVTGEKI+TILKAA V VEPYWPGL
Sbjct: 1   MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGL 46


>AY061562-1|AAL29110.1|  249|Drosophila melanogaster LP11415p
           protein.
          Length = 249

 Score = 31.1 bits (67), Expect = 0.22
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +3

Query: 36  NAFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 164
           N+F  L ++ FK+ S A L    +A++ +D D A+T + ++ +
Sbjct: 173 NSFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215


>AE014298-1718|AAF48118.1|  249|Drosophila melanogaster CG2471-PA
           protein.
          Length = 249

 Score = 31.1 bits (67), Expect = 0.22
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +3

Query: 36  NAFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 164
           N+F  L ++ FK+ S A L    +A++ +D D A+T + ++ +
Sbjct: 173 NSFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,561,252
Number of Sequences: 53049
Number of extensions: 129594
Number of successful extensions: 334
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 24,988,368
effective HSP length: 49
effective length of database: 22,388,967
effective search space used: 447779340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)