Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D15
         (258 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J02645-1|AAA52373.1|  315|Homo sapiens EIF2 protein.                   85   3e-17
BC002513-1|AAH02513.1|  315|Homo sapiens EIF2S1 protein protein.       85   3e-17
AY791884-1|AAV54193.1|  946|Homo sapiens secretory pathway calci...    28   4.7  
AB014603-1|BAA31678.2| 1051|Homo sapiens KIAA0703 protein protein.     28   4.7  
AY672838-1|AAT77413.1|  514|Homo sapiens immunoglobulin-like dom...    23   7.9  
BC044240-1|AAH44240.1|  502|Homo sapiens immunoglobulin-like dom...    23   8.0  

>J02645-1|AAA52373.1|  315|Homo sapiens EIF2 protein.
          Length = 315

 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 41/45 (91%), Positives = 42/45 (93%), Gaps = 1/45 (2%)
 Frame = +3

Query: 87  MP-LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLEYNNIEGM 218
           MP LSCRFYQ K+PEVEDVVMVNVRSIAEMGAYV LLEYNNIEGM
Sbjct: 1   MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGM 45


>BC002513-1|AAH02513.1|  315|Homo sapiens EIF2S1 protein protein.
          Length = 315

 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 41/45 (91%), Positives = 42/45 (93%), Gaps = 1/45 (2%)
 Frame = +3

Query: 87  MP-LSCRFYQEKYPEVEDVVMVNVRSIAEMGAYVHLLEYNNIEGM 218
           MP LSCRFYQ K+PEVEDVVMVNVRSIAEMGAYV LLEYNNIEGM
Sbjct: 1   MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGM 45


>AY791884-1|AAV54193.1|  946|Homo sapiens secretory pathway calcium
           ATPase 2 protein.
          Length = 946

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 246 VFLIAQTVESCPQYCCTPASGRTRP 172
           VF++++ ++ C +YCC+P   +  P
Sbjct: 919 VFILSELLKLCEKYCCSPKRVQMHP 943


>AB014603-1|BAA31678.2| 1051|Homo sapiens KIAA0703 protein protein.
          Length = 1051

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 246  VFLIAQTVESCPQYCCTPASGRTRP 172
            VF++++ ++ C +YCC+P   +  P
Sbjct: 1024 VFILSELLKLCEKYCCSPKRVQMHP 1048


>AY672838-1|AAT77413.1|  514|Homo sapiens immunoglobulin-like
           domain-containing receptor 1 alpha' protein.
          Length = 514

 Score = 23.0 bits (47), Expect(2) = 7.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 222 ESCPQYCC 199
           + CPQYCC
Sbjct: 203 QCCPQYCC 210



 Score = 23.0 bits (47), Expect(2) = 7.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 216 CPQYCCTPASGRTRPS 169
           CP +CC P    + PS
Sbjct: 218 CPAHCCCPEEDLSLPS 233


>BC044240-1|AAH44240.1|  502|Homo sapiens immunoglobulin-like domain
           containing receptor 1 protein.
          Length = 502

 Score = 23.0 bits (47), Expect(2) = 8.0
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 222 ESCPQYCC 199
           + CPQYCC
Sbjct: 191 QCCPQYCC 198



 Score = 23.0 bits (47), Expect(2) = 8.0
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 216 CPQYCCTPASGRTRPS 169
           CP +CC P    + PS
Sbjct: 206 CPAHCCCPEEDLSLPS 221


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,286,587
Number of Sequences: 237096
Number of extensions: 431947
Number of successful extensions: 4839
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4839
length of database: 76,859,062
effective HSP length: 63
effective length of database: 61,922,014
effective search space used: 1362284308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)