Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D14
(229 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30 pro... 93 2e-19
L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30 pro... 93 2e-19
BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30 p... 93 2e-19
BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30 p... 93 2e-19
AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30 p... 93 2e-19
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 32 0.38
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 32 0.38
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 32 0.38
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 32 0.38
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 32 0.38
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 32 0.38
EF638437-1|ABR22588.1| 86|Homo sapiens human factor FVIII prot... 29 2.0
EF638436-1|ABR22587.1| 86|Homo sapiens human factor FVIII prot... 29 2.0
BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein. 28 4.7
BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein. 28 4.7
AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6... 28 4.7
AK097296-1|BAC04994.1| 815|Homo sapiens protein ( Homo sapiens ... 28 4.7
AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6 p... 28 4.7
AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6 p... 28 4.7
>X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = +1
Query: 55 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLRKS 228
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKA LVI+A N P LRKS
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKS 58
>L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = +1
Query: 55 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLRKS 228
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKA LVI+A N P LRKS
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKS 58
>BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = +1
Query: 55 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLRKS 228
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKA LVI+A N P LRKS
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKS 58
>BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = +1
Query: 55 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLRKS 228
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKA LVI+A N P LRKS
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKS 58
>AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/58 (79%), Positives = 50/58 (86%)
Frame = +1
Query: 55 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLRKS 228
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKA LVI+A N P LRKS
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKS 58
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 124 SGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLR 222
+GKYC G + TLK L G ++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 124 SGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLR 222
+GKYC G + TLK L G ++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 124 SGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLR 222
+GKYC G + TLK L G ++I+ N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 124 SGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLR 222
+GKYC G + TLK L G ++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 124 SGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLR 222
+GKYC G + TLK L G ++I+ N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 124 SGKYCLGYKQTLKTLRQGKA*LVIIARNAPPLR 222
+GKYC G + TLK L G ++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>EF638437-1|ABR22588.1| 86|Homo sapiens human factor FVIII
protein.
Length = 86
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 36 VENCYHNGCSKETEKDHRVY*FPSGSGYEVWQIL 137
+ +CY + S+ ++D +V FP GS VWQ+L
Sbjct: 1 LRSCYDDQTSQREKEDDKV--FPGGSHTYVWQVL 32
>EF638436-1|ABR22587.1| 86|Homo sapiens human factor FVIII
protein.
Length = 86
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 36 VENCYHNGCSKETEKDHRVY*FPSGSGYEVWQIL 137
+ +CY + S+ ++D +V FP GS VWQ+L
Sbjct: 1 LRSCYDDQTSQREKEDDKV--FPGGSHTYVWQVL 32
>BC125232-1|AAI25233.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 134 YLPDFITRARRELIDSMVFFCFFAATIMIAV 42
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
>BC125231-1|AAI25232.1| 1500|Homo sapiens ABCA6 protein protein.
Length = 1500
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 134 YLPDFITRARRELIDSMVFFCFFAATIMIAV 42
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
>AY028898-1|AAK30023.1| 1617|Homo sapiens ATP-binding cassette A6
protein.
Length = 1617
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 134 YLPDFITRARRELIDSMVFFCFFAATIMIAV 42
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
>AK097296-1|BAC04994.1| 815|Homo sapiens protein ( Homo sapiens
cDNA FLJ39977 fis, clone SPLEN2029295, moderately
similar to ATP-binding cassette, sub-family A member 8.
).
Length = 815
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 134 YLPDFITRARRELIDSMVFFCFFAATIMIAV 42
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 312 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 342
>AF373328-1|AAM77558.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 134 YLPDFITRARRELIDSMVFFCFFAATIMIAV 42
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
>AF373290-1|AAM77557.1| 1617|Homo sapiens ABC transporter ABCA6
protein.
Length = 1617
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 134 YLPDFITRARRELIDSMVFFCFFAATIMIAV 42
Y+ FI R RR+ F+ FFA+TIM ++
Sbjct: 1114 YMISFIFRKRRKNSGLWSFYFFFASTIMFSI 1144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,094,433
Number of Sequences: 237096
Number of extensions: 657277
Number of successful extensions: 1148
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 76,859,062
effective HSP length: 54
effective length of database: 64,055,878
effective search space used: 1345173438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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