Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D13
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   1.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   3.2  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   5.7  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   5.7  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   5.7  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   7.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   7.5  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 51  NTPEAVVEVYIDGVSDLADAAKLKSKNYHLIVD 149
           N P AVV V++    D        SKN HL V+
Sbjct: 529 NVPGAVVRVFLGPKHDHQGRPISISKNQHLFVE 561


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
 Frame = -2

Query: 113 CSICKVRYSIYIYFN--YSFWSVERVCDHKSIPF 18
           C I  +  ++Y Y    + FW    V   K +PF
Sbjct: 9   CGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPF 42


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 120 KSKNYHLIVDEYEPDTFDAI 179
           ++KNY L VD++   TF A+
Sbjct: 66  RTKNYPLDVDQWHNKTFLAV 85


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/16 (50%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
 Frame = +2

Query: 176 HQT*DK--PKIYKWWE 217
           H T DK  PK+Y+W++
Sbjct: 143 HYTVDKSKPKVYQWFD 158


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/16 (50%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
 Frame = +2

Query: 176 HQT*DK--PKIYKWWE 217
           H T DK  PK+Y+W++
Sbjct: 148 HYTVDKSKPKVYQWFD 163


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/16 (50%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
 Frame = +2

Query: 176 HQT*DK--PKIYKWWE 217
           H T DK  PK+Y+W++
Sbjct: 148 HYTVDKSKPKVYQWFD 163


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 477 NQIEHGVNGILNCRNQ*H 424
           N  E G + +LNC+N  H
Sbjct: 23  NDNEFGFSYLLNCKNYDH 40


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 88  PSIYTSTTASGVLKGSVIISP 26
           P  Y STT +GV+   VI +P
Sbjct: 832 PVSYMSTTMAGVIYPPVIGTP 852


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,805
Number of Sequences: 438
Number of extensions: 2413
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)