Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D12
(550 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF151801-1|AAD34038.1| 483|Homo sapiens CGI-43 protein protein. 106 6e-23
BC132751-1|AAI32752.1| 482|Homo sapiens chromosome 7 open readi... 105 1e-22
BC132749-1|AAI32750.1| 482|Homo sapiens chromosome 7 open readi... 105 1e-22
BC010130-1|AAH10130.1| 482|Homo sapiens chromosome 7 open readi... 105 1e-22
AC079882-1|AAQ93370.1| 482|Homo sapiens unknown protein. 105 1e-22
AC004983-1|AAQ96868.1| 482|Homo sapiens unknown protein. 105 1e-22
Z99714-4|CAI17880.1| 708|Homo sapiens Hermansky-Pudlak syndrome... 32 1.2
CR456392-1|CAG30278.1| 708|Homo sapiens bK1048E9.4 protein. 32 1.2
BC065030-1|AAH65030.1| 708|Homo sapiens Hermansky-Pudlak syndro... 32 1.2
AY043416-1|AAK95330.1| 708|Homo sapiens LE protein protein. 32 1.2
AL365512-1|CAB97208.1| 703|Homo sapiens hypothetical protein pr... 32 1.2
AK057648-1|BAB71540.1| 528|Homo sapiens protein ( Homo sapiens ... 32 1.2
>AF151801-1|AAD34038.1| 483|Homo sapiens CGI-43 protein protein.
Length = 483
Score = 106 bits (254), Expect = 6e-23
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 243 SFFIFNPNFGPTEGEELKRILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSP-EPCEALQ 419
SFFI+NP FGP EG+E +ILFYHP++ + + VGLCEA+++F TFSP +P ++L
Sbjct: 27 SFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 86
Query: 420 TQTKRYIFYQPEKDFWMVLVVRIPYTTK 503
TQ R F +PE++FWMV+VVR P K
Sbjct: 87 TQKNRQFFNEPEENFWMVMVVRCPIIEK 114
>BC132751-1|AAI32752.1| 482|Homo sapiens chromosome 7 open reading
frame 28A protein.
Length = 482
Score = 105 bits (252), Expect = 1e-22
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 243 SFFIFNPNFGPTEGEELKRILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSP-EPCEALQ 419
SFFI+NP FGP EG+E +ILFYHP++ + + VGLCEA+++F TFSP +P ++L
Sbjct: 26 SFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
Query: 420 TQTKRYIFYQPEKDFWMVLVVRIPYTTK 503
TQ R F +PE++FWMV+VVR P K
Sbjct: 86 TQKNRQFFNEPEENFWMVMVVRNPIIEK 113
>BC132749-1|AAI32750.1| 482|Homo sapiens chromosome 7 open reading
frame 28A protein.
Length = 482
Score = 105 bits (252), Expect = 1e-22
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 243 SFFIFNPNFGPTEGEELKRILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSP-EPCEALQ 419
SFFI+NP FGP EG+E +ILFYHP++ + + VGLCEA+++F TFSP +P ++L
Sbjct: 26 SFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
Query: 420 TQTKRYIFYQPEKDFWMVLVVRIPYTTK 503
TQ R F +PE++FWMV+VVR P K
Sbjct: 86 TQKNRQFFNEPEENFWMVMVVRNPIIEK 113
>BC010130-1|AAH10130.1| 482|Homo sapiens chromosome 7 open reading
frame 28B protein.
Length = 482
Score = 105 bits (252), Expect = 1e-22
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 243 SFFIFNPNFGPTEGEELKRILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSP-EPCEALQ 419
SFFI+NP FGP EG+E +ILFYHP++ + + VGLCEA+++F TFSP +P ++L
Sbjct: 26 SFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
Query: 420 TQTKRYIFYQPEKDFWMVLVVRIPYTTK 503
TQ R F +PE++FWMV+VVR P K
Sbjct: 86 TQKNRQFFNEPEENFWMVMVVRNPIIEK 113
>AC079882-1|AAQ93370.1| 482|Homo sapiens unknown protein.
Length = 482
Score = 105 bits (252), Expect = 1e-22
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 243 SFFIFNPNFGPTEGEELKRILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSP-EPCEALQ 419
SFFI+NP FGP EG+E +ILFYHP++ + + VGLCEA+++F TFSP +P ++L
Sbjct: 26 SFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
Query: 420 TQTKRYIFYQPEKDFWMVLVVRIPYTTK 503
TQ R F +PE++FWMV+VVR P K
Sbjct: 86 TQKNRQFFNEPEENFWMVMVVRNPIIEK 113
>AC004983-1|AAQ96868.1| 482|Homo sapiens unknown protein.
Length = 482
Score = 105 bits (252), Expect = 1e-22
Identities = 46/88 (52%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 243 SFFIFNPNFGPTEGEELKRILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSP-EPCEALQ 419
SFFI+NP FGP EG+E +ILFYHP++ + + VGLCEA+++F TFSP +P ++L
Sbjct: 26 SFFIYNPRFGPREGQEENKILFYHPNEVEKNEKIRNVGLCEAIVQFTRTFSPSKPAKSLH 85
Query: 420 TQTKRYIFYQPEKDFWMVLVVRIPYTTK 503
TQ R F +PE++FWMV+VVR P K
Sbjct: 86 TQKNRQFFNEPEENFWMVMVVRNPIIEK 113
>Z99714-4|CAI17880.1| 708|Homo sapiens Hermansky-Pudlak syndrome 4
protein.
Length = 708
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 NSFFIFNPNFGPTEGEELKR-ILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSPEPCEAL 416
N FF+++ + EG+ + I +++PSQT D Q++ G V++ + S P +
Sbjct: 16 NYFFLYDGSKVKEEGDPTRAGICYFYPSQTLLDQQELLCGQIAGVVRCVSDISDSPPTLV 75
Query: 417 QTQTKRYIFYQPEKDFWMV-LVVRIP 491
+ + ++ W++ V +P
Sbjct: 76 RLRKLKFAIKVDGDYLWVLGCAVELP 101
>CR456392-1|CAG30278.1| 708|Homo sapiens bK1048E9.4 protein.
Length = 708
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 NSFFIFNPNFGPTEGEELKR-ILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSPEPCEAL 416
N FF+++ + EG+ + I +++PSQT D Q++ G V++ + S P +
Sbjct: 16 NYFFLYDGSKVKEEGDPTRAGICYFYPSQTLLDQQELLCGQIAGVVRCVSDISDSPPTLV 75
Query: 417 QTQTKRYIFYQPEKDFWMV-LVVRIP 491
+ + ++ W++ V +P
Sbjct: 76 RLRKLKFAIKVDGDYLWVLGCAVELP 101
>BC065030-1|AAH65030.1| 708|Homo sapiens Hermansky-Pudlak syndrome
4 protein.
Length = 708
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 NSFFIFNPNFGPTEGEELKR-ILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSPEPCEAL 416
N FF+++ + EG+ + I +++PSQT D Q++ G V++ + S P +
Sbjct: 16 NYFFLYDGSKVKEEGDPTRAGICYFYPSQTLLDQQELLCGQIAGVVRCVSDISDSPPTLV 75
Query: 417 QTQTKRYIFYQPEKDFWMV-LVVRIP 491
+ + ++ W++ V +P
Sbjct: 76 RLRKLKFAIKVDGDYLWVLGCAVELP 101
>AY043416-1|AAK95330.1| 708|Homo sapiens LE protein protein.
Length = 708
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 NSFFIFNPNFGPTEGEELKR-ILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSPEPCEAL 416
N FF+++ + EG+ + I +++PSQT D Q++ G V++ + S P +
Sbjct: 16 NYFFLYDGSKVKEEGDPTRAGICYFYPSQTLLDQQELLCGQIAGVVRCVSDISDSPPTLV 75
Query: 417 QTQTKRYIFYQPEKDFWMV-LVVRIP 491
+ + ++ W++ V +P
Sbjct: 76 RLRKLKFAIKVDGDYLWVLGCAVELP 101
>AL365512-1|CAB97208.1| 703|Homo sapiens hypothetical protein
protein.
Length = 703
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 NSFFIFNPNFGPTEGEELKR-ILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSPEPCEAL 416
N FF+++ + EG+ + I +++PSQT D Q++ G V++ + S P +
Sbjct: 11 NYFFLYDGSKVKEEGDPTRAGICYFYPSQTLLDQQELLCGQIAGVVRCVSDISDSPPTLV 70
Query: 417 QTQTKRYIFYQPEKDFWMV-LVVRIP 491
+ + ++ W++ V +P
Sbjct: 71 RLRKLKFAIKVDGDYLWVLGCAVELP 96
>AK057648-1|BAB71540.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ33086 fis, clone TRACH2000461. ).
Length = 528
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +3
Query: 240 NSFFIFNPNFGPTEGEELKR-ILFYHPSQTTHDTQKMQVGLCEAVIKFMLTFSPEPCEAL 416
N FF+++ + EG+ + I +++PSQT D Q++ G V++ + S P +
Sbjct: 16 NYFFLYDGSKVKEEGDPTRAGICYFYPSQTLLDQQELLCGQIAGVVRCVSDISDSPPTLV 75
Query: 417 QTQTKRYIFYQPEKDFWMV-LVVRIP 491
+ + ++ W++ V +P
Sbjct: 76 RLRKLKFAIKVDGDYLWVLGCAVELP 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,088,756
Number of Sequences: 237096
Number of extensions: 1406791
Number of successful extensions: 2341
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2334
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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