Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D10
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119552-1|AAM50206.1|  321|Drosophila melanogaster GH27568p pro...    46   1e-05
AE014298-2011|AAF48353.2|  321|Drosophila melanogaster CG32597-P...    46   1e-05
BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p pro...    27   7.0  
AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA...    27   7.0  
AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB...    27   7.0  

>AY119552-1|AAM50206.1|  321|Drosophila melanogaster GH27568p
           protein.
          Length = 321

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +2

Query: 320 FGSSVAIHKLRETKWFKHDEQNILCA 397
           FGSSVA+ KLRE+KWFK +EQ I CA
Sbjct: 80  FGSSVAVQKLRESKWFKPEEQRIFCA 105


>AE014298-2011|AAF48353.2|  321|Drosophila melanogaster CG32597-PA
           protein.
          Length = 321

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +2

Query: 320 FGSSVAIHKLRETKWFKHDEQNILCA 397
           FGSSVA+ KLRE+KWFK +EQ I CA
Sbjct: 80  FGSSVAVQKLRESKWFKPEEQRIFCA 105


>BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p
           protein.
          Length = 614

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 105 DKHKLIFKCRRGLILSVRVRSGVQW 179
           D+H++ FKCR   ++  R    V+W
Sbjct: 264 DEHEITFKCRNQPVVQARHTRSVEW 288


>AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA,
           isoform A protein.
          Length = 614

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 105 DKHKLIFKCRRGLILSVRVRSGVQW 179
           D+H++ FKCR   ++  R    V+W
Sbjct: 264 DEHEITFKCRNQPVVQARHTRSVEW 288


>AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB,
           isoform B protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 105 DKHKLIFKCRRGLILSVRVRSGVQW 179
           D+H++ FKCR   ++  R    V+W
Sbjct: 125 DEHEITFKCRNQPVVQARHTRSVEW 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,958,527
Number of Sequences: 53049
Number of extensions: 375243
Number of successful extensions: 920
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)