Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D09
         (370 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0IQL4 Cluster: Os12g0114200 protein; n=6; Oryza sativa...    34   0.72 
UniRef50_Q4UH85 Cluster: Phosphoinositide 3-kinase-like protein,...    34   0.95 
UniRef50_A7GKW4 Cluster: CDP-alcohol phosphatidyltransferase; n=...    31   8.9  
UniRef50_A1SXQ3 Cluster: Transporter major facilitator superfami...    31   8.9  

>UniRef50_Q0IQL4 Cluster: Os12g0114200 protein; n=6; Oryza
           sativa|Rep: Os12g0114200 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 828

 Score = 34.3 bits (75), Expect = 0.72
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +1

Query: 244 CVTNNVIKDFSLNEYVCLCCMFFTKKV---VIYHPVG 345
           C+  N+I D S N++  LC + F +K+   +IYH +G
Sbjct: 139 CIVQNIIVDISFNQFGGLCTLCFLEKIYLGLIYHKLG 175


>UniRef50_Q4UH85 Cluster: Phosphoinositide 3-kinase-like protein,
           putative; n=1; Theileria annulata|Rep: Phosphoinositide
           3-kinase-like protein, putative - Theileria annulata
          Length = 1275

 Score = 33.9 bits (74), Expect = 0.95
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +3

Query: 96  KKLSKNINFNPRYGCKFFILCFFLCRSRFFYC*KIKVFLTSKL 224
           KK+  N NFN +Y CK FI  F L + + F   ++K F   K+
Sbjct: 74  KKIRNNFNFNCKYKCKLFIKYFKLTKIKLFN--RVKYFNRFKI 114


>UniRef50_A7GKW4 Cluster: CDP-alcohol phosphatidyltransferase; n=1;
           Bacillus cereus subsp. cytotoxis NVH 391-98|Rep:
           CDP-alcohol phosphatidyltransferase - Bacillus cereus
           subsp. cytotoxis NVH 391-98
          Length = 217

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +3

Query: 21  DKHILCQKMLTIFYF*IAFSLRHFEKKLSKNINFNPRYGCKFFILC-FFLCRSRFFYC*K 197
           DK+ + +K++ +F   IAFS  +F+ KL++  N    YG K  ++C FF   + +     
Sbjct: 45  DKYSI-RKIILMFTI-IAFS-DYFDGKLARKYNLETSYGAKLDVMCDFFFMITSYSTLIF 101

Query: 198 IKVF 209
           +KVF
Sbjct: 102 LKVF 105


>UniRef50_A1SXQ3 Cluster: Transporter major facilitator superfamily
           MFS_1 precursor; n=1; Psychromonas ingrahamii 37|Rep:
           Transporter major facilitator superfamily MFS_1
           precursor - Psychromonas ingrahamii (strain 37)
          Length = 402

 Score = 30.7 bits (66), Expect = 8.9
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 96  KKLSKNINFNPRYGCKFFILC-FFLCRSRFFYC*KIKVFLTSKLN 227
           K   KN+N++   G  FF++C FF+  +   Y   I +++T  L+
Sbjct: 194 KSAPKNVNWSKISGVLFFLICIFFIFTANNMYITSISLYITQALD 238


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,732,015
Number of Sequences: 1657284
Number of extensions: 6612522
Number of successful extensions: 14651
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14647
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)