Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D09
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   9.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   9.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 280 NEYVCLCCMFFTKKV 324
           N+Y CLC + +T KV
Sbjct: 119 NQYQCLCGVGWTGKV 133


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 142 LQPYLGLKLIFLDNFFS 92
           LQ Y  + L+FL  FF+
Sbjct: 73  LQRYCSVLLVFLTYFFN 89


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 142 LQPYLGLKLIFLDNFFS 92
           LQ Y  + L+FL  FF+
Sbjct: 69  LQRYCSVLLVFLTYFFN 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,831
Number of Sequences: 336
Number of extensions: 2127
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)