Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D09
         (370 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101357-1|AAI01358.1|  582|Homo sapiens BTBD9 protein protein.        29   4.7  
BC101355-1|AAI01356.1|  544|Homo sapiens BTB (POZ) domain contai...    29   4.7  
BC101354-1|AAI01355.1|  544|Homo sapiens BTB (POZ) domain contai...    29   4.7  
AL079341-1|CAI20152.1|  316|Homo sapiens protein ( Human DNA seq...    29   4.7  
AK057507-1|BAB71514.1|  544|Homo sapiens protein ( Homo sapiens ...    29   4.7  
AB067467-1|BAB67773.1|  642|Homo sapiens KIAA1880 protein protein.     29   4.7  

>BC101357-1|AAI01358.1|  582|Homo sapiens BTBD9 protein protein.
          Length = 582

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 244 CVTNNVIKDFSLNEYVCLCCMFFTK 318
           C+T +V   +SL +  C+CCMF  +
Sbjct: 84  CMTFDVASLYSLPKLTCMCCMFMDR 108


>BC101355-1|AAI01356.1|  544|Homo sapiens BTB (POZ) domain
           containing 9 protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 244 CVTNNVIKDFSLNEYVCLCCMFFTK 318
           C+T +V   +SL +  C+CCMF  +
Sbjct: 75  CMTFDVASLYSLPKLTCMCCMFMDR 99


>BC101354-1|AAI01355.1|  544|Homo sapiens BTB (POZ) domain
           containing 9 protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 244 CVTNNVIKDFSLNEYVCLCCMFFTK 318
           C+T +V   +SL +  C+CCMF  +
Sbjct: 75  CMTFDVASLYSLPKLTCMCCMFMDR 99


>AL079341-1|CAI20152.1|  316|Homo sapiens protein ( Human DNA
           sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 
           Contains the 5' end of the gene for a novel protein
           (contains  ).
          Length = 316

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 244 CVTNNVIKDFSLNEYVCLCCMFFTK 318
           C+T +V   +SL +  C+CCMF  +
Sbjct: 75  CMTFDVASLYSLPKLTCMCCMFMDR 99


>AK057507-1|BAB71514.1|  544|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32945 fis, clone TESTI2007867, weakly similar to
           RING CANAL PROTEIN. ).
          Length = 544

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 244 CVTNNVIKDFSLNEYVCLCCMFFTK 318
           C+T +V   +SL +  C+CCMF  +
Sbjct: 75  CMTFDVASLYSLPKLTCMCCMFMDR 99


>AB067467-1|BAB67773.1|  642|Homo sapiens KIAA1880 protein protein.
          Length = 642

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 244 CVTNNVIKDFSLNEYVCLCCMFFTK 318
           C+T +V   +SL +  C+CCMF  +
Sbjct: 173 CMTFDVASLYSLPKLTCMCCMFMDR 197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,869,113
Number of Sequences: 237096
Number of extensions: 950473
Number of successful extensions: 1253
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)