Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D09
(370 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 0.87
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 0.87
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 1.1
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 1.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 1.5
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 2.0
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 21 6.1
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 20 8.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 8.1
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 20 8.1
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 0.87
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 94 KKNYLKISILIPDMVVNFLYCVFFYVDQGS 183
K + ++I+IP M ++FL + FY+ S
Sbjct: 243 KTLFYTVNIIIPCMGISFLTVLTFYLPSDS 272
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 0.87
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 94 KKNYLKISILIPDMVVNFLYCVFFYVDQGS 183
K + ++I+IP M ++FL + FY+ S
Sbjct: 243 KTLFYTVNIIIPCMGISFLTVLTFYLPSDS 272
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +3
Query: 15 PFDKHILCQKMLTIFYF*IAFSLRHFEKKLSKNI 116
PFD+ K + Y LRH ++K N+
Sbjct: 161 PFDEQTCVLKFGSWTYDGFKVDLRHMDEKSGSNV 194
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 1.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 94 KKNYLKISILIPDMVVNFLYCVFFYVDQGS 183
K + ++++IP M ++FL + FY+ S
Sbjct: 239 KTLFYTVNLIIPCMGISFLTVLVFYLPSDS 268
Score = 20.6 bits (41), Expect = 6.1
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +3
Query: 15 PFDKHILCQKMLTIFYF*IAFSLRHFEKKLSKNI 116
PFD+ K + Y LRH ++ KN+
Sbjct: 157 PFDEQTCVMKFGSWTYDGFQVDLRHIDEIRGKNV 190
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 88 ILKKNYLKISILIPDMVVNFLYCVFFYVDQG 180
+L +L + ++ + N L CV Y D+G
Sbjct: 25 VLLVGFLFLILIFLSVAGNILVCVAIYTDRG 55
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/39 (23%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 70 LLFRYVILKKN-YLKISILIPDMVVNFLYCVFFYVDQGS 183
++F + +K + ++++IP + ++FL + FY+ S
Sbjct: 226 IVFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDS 264
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 22.2 bits (45), Expect = 2.0
Identities = 10/41 (24%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 64 SKLLFRYVILKKN-YLKISILIPDMVVNFLYCVFFYVDQGS 183
S + F + +K + ++++IP + + FL + FY+ S
Sbjct: 237 SDITFNITMRRKTLFYTVNLIIPCVGITFLTVLVFYLPSDS 277
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 20.6 bits (41), Expect = 6.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 234 LANSVWM*GILLF 196
L NSVW G+L+F
Sbjct: 37 LDNSVWADGLLVF 49
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 20.2 bits (40), Expect = 8.1
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +1
Query: 112 ISILIPDMVVNFLY 153
+S+LIP +++ F+Y
Sbjct: 16 LSLLIPALILYFIY 29
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.2 bits (40), Expect = 8.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 15 PFDKHIL 35
PFDKHIL
Sbjct: 888 PFDKHIL 894
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 20.2 bits (40), Expect = 8.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 281 TNTFVYVVCFLRKRLSFTIPLVW*KLCFSS 370
T+ F Y R+R + I +VW +C S+
Sbjct: 149 TDPFTYPSKMSRRRAAVLIAIVW--ICSSA 176
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,325
Number of Sequences: 438
Number of extensions: 2410
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8804355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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