Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D08
         (437 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    31   0.024
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   2.7  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   4.8  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    23   6.3  
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    23   6.3  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    22   8.3  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    22   8.3  

>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 30.7 bits (66), Expect = 0.024
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = -3

Query: 360 VIVLLCLIIFVKADVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCD--CWCKPGTYRV 187
           ++VL+ LI  V AD    +D       CG     A  S +    + C   C+CKP   R 
Sbjct: 122 LMVLVLLINVVIADGDTCNDANERFLECGPVYQLACDSRYERDTYNCTEGCFCKPSYIRS 181

Query: 186 IDTNDCVTLEHC 151
            D   C+   +C
Sbjct: 182 SDGGPCIPTNNC 193


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 359 TLQTFIVKPSC-RIRHEARILHAD 427
           T+   + +PS  R+RH+ RI HAD
Sbjct: 210 TIVPVVNEPSSPRMRHQGRIRHAD 233


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 261  CAPRSSH--SYPKHTCDCWCKPG 199
            C P  S+  S   ++ DC+CKPG
Sbjct: 941  CDPIGSYNASCDTYSGDCFCKPG 963


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 16/86 (18%)
 Frame = -3

Query: 375 MKVWSVIVLLCLIIFVKADVKCRSDEYTP------GPN-----CGLE--PTCAPRSSHSY 235
           MK  ++   L ++IF   +  C      P      GPN     CG     TCA  +    
Sbjct: 1   MKPVAMFACLIVLIFTLQNAHCACPYAHPYPYDVCGPNEEFQTCGTACPNTCADLNELQK 60

Query: 234 P-KHTC--DCWCKPGTYRVIDTNDCV 166
           P    C   C+CKPG  R      C+
Sbjct: 61  PCTKQCIQGCFCKPGFVRESKEGKCI 86


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -3

Query: 282 NCGLEPTCAPRSSHSY-PKHTCDC 214
           NC  EP CA R+   Y  K   DC
Sbjct: 94  NCANEPYCAARTVQGYMRKFGQDC 117


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 255 PRSSHSYPKHTCDCWCKPG 199
           P  S    K+T DCW K G
Sbjct: 246 PCKSEVMYKNTLDCWVKIG 264


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 255 PRSSHSYPKHTCDCWCKPG 199
           P  S    K+T DCW K G
Sbjct: 246 PCKSEVMYKNTLDCWVKIG 264


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,321
Number of Sequences: 2352
Number of extensions: 8293
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)