Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D08
         (437 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   1.9  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   5.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   5.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   5.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 209 HQQS-QVCFGYECELRGAHVGSSP 277
           HQ + Q+ +G++    G H+ SSP
Sbjct: 796 HQHAAQMIYGHQQSHHGLHINSSP 819


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = -3

Query: 333 FVKADVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDC 214
           F   D  CR+ +  P      E      ++ S+ + +CDC
Sbjct: 52  FKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDC 91


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = -3

Query: 333 FVKADVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDC 214
           F   D  CR+ +  P      E      ++ S+ + +CDC
Sbjct: 57  FKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDC 96


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -3

Query: 216 CWCKPGTYRVIDTNDC 169
           C CKPG    ++  +C
Sbjct: 247 CHCKPGYQADVEKQEC 262



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 219 DCWCKPGTYRVIDTNDCVTLE 157
           DCW K  T+R    N   TL+
Sbjct: 873 DCWQKERTHRPTFANLTQTLD 893


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/40 (25%), Positives = 17/40 (42%)
 Frame = -3

Query: 333 FVKADVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDC 214
           F   D  CR+ +  P      E      ++ S+ + +CDC
Sbjct: 57  FKHTDACCRTHDMCPDVMSAGESKHGLTNTASHTRLSCDC 96


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 104 ITSITSNNYSCLVC 145
           +T+I    Y CL+C
Sbjct: 54  LTNIEEKTYQCLLC 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,166
Number of Sequences: 438
Number of extensions: 2374
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)