Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D04
         (318 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   3.6  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    22   4.8  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          21   8.4  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 179 KLRISEKANVXEEFSHETIKASKRQ 253
           K  + E AN   +F HE  KAS+ Q
Sbjct: 452 KRYLPELANYPAQFVHEPWKASREQ 476


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 258 LFCRFEALIVSWENSSMTFAFSLIL 184
           +FC     ++SW  + +TFA  L L
Sbjct: 619 IFCIAVMFLISWPTALITFAAVLSL 643


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +2

Query: 215  EFSHETIKASKRQNKRKHGEN*SEQNTTYLFPT 313
            +   + ++A + Q +R+H  + S    +  FPT
Sbjct: 997  QLQQQKLRARREQQRREHSNSFSYNYGSPAFPT 1029


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 281,223
Number of Sequences: 2352
Number of extensions: 4346
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)