Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D04
(318 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF160882-1|AAD46823.1| 428|Drosophila melanogaster GH12068p pro... 70 6e-13
AF145305-1|AAF08386.1| 428|Drosophila melanogaster 26S proteaso... 70 6e-13
AE014297-3377|AAF56177.1| 428|Drosophila melanogaster CG10370-P... 70 6e-13
AF134402-1|AAD24194.1| 431|Drosophila melanogaster Tat-binding ... 69 1e-12
AY069069-1|AAL39214.1| 245|Drosophila melanogaster GH08782p pro... 28 3.0
AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA... 28 3.0
AE014134-317|AAF51324.1| 245|Drosophila melanogaster CG10908-PA... 28 3.0
BT004897-1|AAO47875.1| 856|Drosophila melanogaster LD13416p pro... 27 5.2
AE014296-85|AAN11443.2| 856|Drosophila melanogaster CG1228-PB, ... 27 5.2
X14569-1|CAA32707.1| 490|Drosophila melanogaster protein ( Dros... 26 9.1
X12506-1|CAA31024.1| 490|Drosophila melanogaster twist protein ... 26 9.1
BT025192-1|ABF17883.1| 490|Drosophila melanogaster FI01303p pro... 26 9.1
AY118454-1|AAM49823.1| 489|Drosophila melanogaster AT17310p pro... 26 9.1
AY075213-1|AAL68080.1| 489|Drosophila melanogaster AT15089p pro... 26 9.1
AE013599-3525|ABC66041.1| 490|Drosophila melanogaster CG2956-PB... 26 9.1
AE013599-3524|AAF46941.1| 490|Drosophila melanogaster CG2956-PA... 26 9.1
>AF160882-1|AAD46823.1| 428|Drosophila melanogaster GH12068p
protein.
Length = 428
Score = 70.1 bits (164), Expect = 6e-13
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 59 MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLL*QR-KLRISEKANVXEEFSHETI 235
MA TLEDKSIWEDGEE+L EEV+RM TDEI+SRTRL+ K+ SE + E +
Sbjct: 1 MAQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNE 60
Query: 236 KASKRQNKRK 265
K K K
Sbjct: 61 KIKDNTEKIK 70
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +3
Query: 225 TKQSRLQNDKIKENTEKIKVNKTLP 299
T + + QN+KIK+NTEKIKVNKTLP
Sbjct: 52 THEIQAQNEKIKDNTEKIKVNKTLP 76
>AF145305-1|AAF08386.1| 428|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p50 protein.
Length = 428
Score = 70.1 bits (164), Expect = 6e-13
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 59 MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLL*QR-KLRISEKANVXEEFSHETI 235
MA TLEDKSIWEDGEE+L EEV+RM TDEI+SRTRL+ K+ SE + E +
Sbjct: 1 MAQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNE 60
Query: 236 KASKRQNKRK 265
K K K
Sbjct: 61 KIKDNTEKIK 70
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +3
Query: 225 TKQSRLQNDKIKENTEKIKVNKTLP 299
T + + QN+KIK+NTEKIKVNKTLP
Sbjct: 52 THEIQAQNEKIKDNTEKIKVNKTLP 76
>AE014297-3377|AAF56177.1| 428|Drosophila melanogaster CG10370-PA
protein.
Length = 428
Score = 70.1 bits (164), Expect = 6e-13
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 59 MATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLL*QR-KLRISEKANVXEEFSHETI 235
MA TLEDKSIWEDGEE+L EEV+RM TDEI+SRTRL+ K+ SE + E +
Sbjct: 1 MAQTLEDKSIWEDGEESLGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNE 60
Query: 236 KASKRQNKRK 265
K K K
Sbjct: 61 KIKDNTEKIK 70
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +3
Query: 225 TKQSRLQNDKIKENTEKIKVNKTLP 299
T + + QN+KIK+NTEKIKVNKTLP
Sbjct: 52 THEIQAQNEKIKDNTEKIKVNKTLP 76
>AF134402-1|AAD24194.1| 431|Drosophila melanogaster Tat-binding
protein-1 protein.
Length = 431
Score = 68.9 bits (161), Expect = 1e-12
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 53 ITMATTLEDKSIWEDGEEALSEEVLRMPTDEIISRTRLL*QR-KLRISEKANVXEEFSHE 229
+ MA TLEDKSIWEDGEE+L E+V+RM TDEI+SRTRL+ K+ SE + E +
Sbjct: 3 LDMAQTLEDKSIWEDGEESLGEKVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQ 62
Query: 230 TIKASKRQNKRK 265
K K K
Sbjct: 63 NEKIKDNTEKIK 74
Score = 41.9 bits (94), Expect = 2e-04
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +3
Query: 225 TKQSRLQNDKIKENTEKIKVNKTLP 299
T + + QN+KIK+NTEKIKVNKTLP
Sbjct: 56 THEIQAQNEKIKDNTEKIKVNKTLP 80
>AY069069-1|AAL39214.1| 245|Drosophila melanogaster GH08782p
protein.
Length = 245
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 258 LFCRFEALIVSWENSSMTFAFSLILNFRCHRSLVRLMISS 139
+ CRF+ + + W + + FS + +RC SL ISS
Sbjct: 26 MLCRFDVIPLHWLHLDRSAVFSKLQLWRCMTSLFVFPISS 65
>AE014297-309|AAN13252.1| 1393|Drosophila melanogaster CG31551-PA
protein.
Length = 1393
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 149 ISRTRLL*QRKLRISEKANVXEEFSHETIKASKRQNKRKHGE 274
+ R R L R+LR ++ V E+ HE KR+ +R+H E
Sbjct: 263 LKRARQLRDRRLR-EQQLKVKEQRDHERHMLLKRREERRHQE 303
>AE014134-317|AAF51324.1| 245|Drosophila melanogaster CG10908-PA
protein.
Length = 245
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 258 LFCRFEALIVSWENSSMTFAFSLILNFRCHRSLVRLMISS 139
+ CRF+ + + W + + FS + +RC SL ISS
Sbjct: 26 MLCRFDVIPLHWLHLDRSAVFSKLQLWRCMTSLFVFPISS 65
>BT004897-1|AAO47875.1| 856|Drosophila melanogaster LD13416p
protein.
Length = 856
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -2
Query: 293 CFVHFNFLRVFFYFVVLKP*LFRGKIP 213
CF+H +F+ V +++ +K + GK+P
Sbjct: 6 CFLHSSFILVMCFYLQIKRNILLGKLP 32
>AE014296-85|AAN11443.2| 856|Drosophila melanogaster CG1228-PB,
isoform B protein.
Length = 856
Score = 27.1 bits (57), Expect = 5.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -2
Query: 293 CFVHFNFLRVFFYFVVLKP*LFRGKIP 213
CF+H +F+ V +++ +K + GK+P
Sbjct: 6 CFLHSSFILVMCFYLQIKRNILLGKLP 32
>X14569-1|CAA32707.1| 490|Drosophila melanogaster protein (
Drosophila melanogastertwist mRNA. ).
Length = 490
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 173 QRKLRISEKANVXEEFSHETIKASKRQNKRKHGEN*SEQNTTYLFPTL 316
+R R K +EFS++ + A+ R+ +R N + ++ + PTL
Sbjct: 345 RRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTL 392
>X12506-1|CAA31024.1| 490|Drosophila melanogaster twist protein
protein.
Length = 490
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 173 QRKLRISEKANVXEEFSHETIKASKRQNKRKHGEN*SEQNTTYLFPTL 316
+R R K +EFS++ + A+ R+ +R N + ++ + PTL
Sbjct: 345 RRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTL 392
>BT025192-1|ABF17883.1| 490|Drosophila melanogaster FI01303p
protein.
Length = 490
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 173 QRKLRISEKANVXEEFSHETIKASKRQNKRKHGEN*SEQNTTYLFPTL 316
+R R K +EFS++ + A+ R+ +R N + ++ + PTL
Sbjct: 345 RRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTL 392
>AY118454-1|AAM49823.1| 489|Drosophila melanogaster AT17310p
protein.
Length = 489
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 173 QRKLRISEKANVXEEFSHETIKASKRQNKRKHGEN*SEQNTTYLFPTL 316
+R R K +EFS++ + A+ R+ +R N + ++ + PTL
Sbjct: 344 RRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTL 391
>AY075213-1|AAL68080.1| 489|Drosophila melanogaster AT15089p
protein.
Length = 489
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 173 QRKLRISEKANVXEEFSHETIKASKRQNKRKHGEN*SEQNTTYLFPTL 316
+R R K +EFS++ + A+ R+ +R N + ++ + PTL
Sbjct: 344 RRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTL 391
>AE013599-3525|ABC66041.1| 490|Drosophila melanogaster CG2956-PB,
isoform B protein.
Length = 490
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 173 QRKLRISEKANVXEEFSHETIKASKRQNKRKHGEN*SEQNTTYLFPTL 316
+R R K +EFS++ + A+ R+ +R N + ++ + PTL
Sbjct: 345 RRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTL 392
>AE013599-3524|AAF46941.1| 490|Drosophila melanogaster CG2956-PA,
isoform A protein.
Length = 490
Score = 26.2 bits (55), Expect = 9.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 173 QRKLRISEKANVXEEFSHETIKASKRQNKRKHGEN*SEQNTTYLFPTL 316
+R R K +EFS++ + A+ R+ +R N + ++ + PTL
Sbjct: 345 RRLKRKPSKTEETDEFSNQRVMANVRERQRTQSLNDAFKSLQQIIPTL 392
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,835,056
Number of Sequences: 53049
Number of extensions: 196004
Number of successful extensions: 471
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -