Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D03
(514 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 28 0.065
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.086
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.086
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.086
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.086
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 27 0.086
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.26
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.26
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.35
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 24 0.80
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 3.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 4.3
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 4.3
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 5.7
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 5.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 5.7
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 5.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 7.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 7.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 7.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 9.9
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 27.9 bits (59), Expect = 0.065
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +3
Query: 60 MLWDLRSGKCHNKLEPHTDSKVSRPDIGKWIGSASLTDDWIVCGGGPR 203
+L+++ S K N + S P I + G +S+ D I+CGG R
Sbjct: 314 ILYNVMSAKYRNAFKETCRCSPSNPSITR-TGLSSVRDSSIICGGNKR 360
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.086
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 322 CLAVPPAIIQSSWKND-TWMPW 260
CL VPP I +S+ K D TW P+
Sbjct: 99 CLYVPPGIFKSTCKIDITWFPF 120
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.086
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 322 CLAVPPAIIQSSWKND-TWMPW 260
CL VPP I +S+ K D TW P+
Sbjct: 99 CLYVPPGIFKSTCKIDITWFPF 120
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.5 bits (58), Expect = 0.086
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 322 CLAVPPAIIQSSWKND-TWMPW 260
CL VPP I +S+ K D TW P+
Sbjct: 167 CLYVPPGIFKSTCKIDITWFPF 188
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.5 bits (58), Expect = 0.086
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 322 CLAVPPAIIQSSWKND-TWMPW 260
CL VPP I +S+ K D TW P+
Sbjct: 167 CLYVPPGIFKSTCKIDITWFPF 188
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 27.5 bits (58), Expect = 0.086
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 322 CLAVPPAIIQSSWKND-TWMPW 260
CL VPP I +S+ K D TW P+
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPF 157
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.26
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -1
Query: 322 CLAVPPAIIQSSWKND-TWMPW 260
CL VPP I +S+ K D W P+
Sbjct: 99 CLYVPPGIFKSTCKMDVAWFPF 120
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.26
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -1
Query: 322 CLAVPPAIIQSSWKND-TWMPW 260
CL VPP I +S+ K D W P+
Sbjct: 99 CLYVPPGIFKSTCKMDIAWFPF 120
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.35
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -1
Query: 322 CLAVPPAIIQSSWKND-TWMPW 260
CL VPP I +S+ K D W P+
Sbjct: 99 CLYVPPGIFKSTCKIDIAWFPF 120
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.2 bits (50), Expect = 0.80
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -1
Query: 322 CLAVPPAIIQSSWKND-TWMPW 260
CL VPP I S+ K D W P+
Sbjct: 99 CLYVPPGIFGSTCKIDIAWFPF 120
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 467 RCAEINIWTRTGYGQYVVGTRPQNCRVYSGR*D 369
RC+ +N R + Q G NC + +G D
Sbjct: 445 RCSNLNHMMREEFYQSQYGDPINNCEIKAGEID 477
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 4.3
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +3
Query: 345 GEVKVELPVSPTTVYSAVLRTSPNNVLAIAGSSPDIDLCTSFNYRDQVLH 494
GEV + PT + ++ T+ ++ S DI C S + + LH
Sbjct: 288 GEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLH 337
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.8 bits (44), Expect = 4.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 153 GSASLTDDWIVCGGGPRLALWHLRSLDAVTVFDIPDHG 266
GS + ++ G GP+ HLRSL V D+P G
Sbjct: 322 GSVNTPQLLMLSGIGPKE---HLRSLGIPVVVDLPGVG 356
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 138 IGKWIGSASLTDDWIVC 188
+GKWI L W+ C
Sbjct: 99 LGKWIFGIHLCKLWLTC 115
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 138 IGKWIGSASLTDDWIVC 188
+GKWI L W+ C
Sbjct: 99 LGKWIFGIHLCKLWLTC 115
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 5.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 108 HTDSKVSRPDIGKWIGSASLTD 173
+TD K+S PDI G+ S+ +
Sbjct: 723 YTDLKLSNPDISVEDGTLSINN 744
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 138 IGKWIGSASLTDDWIVC 188
+GKWI L W+ C
Sbjct: 99 LGKWIFGIHLCKLWLTC 115
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 274 TWMPWSGISNTVTASKDR 221
T+MP SGI N V + D+
Sbjct: 332 TYMPPSGIPNWVPGNHDQ 349
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 274 TWMPWSGISNTVTASKDR 221
T+MP SGI N V + D+
Sbjct: 332 TYMPPSGIPNWVPGNHDQ 349
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 93 NKLEPHTDSKVSRPDIGKW 149
NK +P T K +RP GK+
Sbjct: 1022 NKPKPATGGKGTRPKRGKY 1040
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 9.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = -2
Query: 423 VRCWDSSSKLPSIQW 379
+RC + LP +QW
Sbjct: 421 IRCHVAGEPLPRVQW 435
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,651
Number of Sequences: 438
Number of extensions: 3331
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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