Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D02
         (282 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000069DB1F Cluster: UPI000069DB1F related cluster; n...    36   0.13 
UniRef50_UPI0000EBE226 Cluster: PREDICTED: hypothetical protein;...    33   1.2  
UniRef50_Q4J1Z5 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_UPI0000E87C7B Cluster: Pyrrolo-quinoline quinone; n=1; ...    30   8.6  
UniRef50_UPI0000DB6B2A Cluster: PREDICTED: similar to CG9619-PA;...    30   8.6  

>UniRef50_UPI000069DB1F Cluster: UPI000069DB1F related cluster; n=1;
           Xenopus tropicalis|Rep: UPI000069DB1F UniRef100 entry -
           Xenopus tropicalis
          Length = 90

 Score = 36.3 bits (80), Expect = 0.13
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +3

Query: 9   QCPQPPVS*ACNLAPLNTPAGPTPASRCRPPT 104
           QC  PPVS  C   P++T   PTP S   PPT
Sbjct: 43  QCAPPPVSLVCPPTPVSTVCPPTPVSPVCPPT 74



 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 12  CPQPPVS*ACNLAPLNTPAGPTPASRCRPPT 104
           CP  PVS  C   P++    PTP S   PP+
Sbjct: 53  CPPTPVSTVCPPTPVSPVCPPTPVSPVCPPS 83


>UniRef50_UPI0000EBE226 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 196

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +3

Query: 9   QCPQPPVS*ACNLAPLNTPAGPTPASRCRPP 101
           Q P+PP S AC  A    P  P P   C PP
Sbjct: 77  QAPRPPASPACGPASAFIPRAPRPGLLCTPP 107


>UniRef50_Q4J1Z5 Cluster: Putative uncharacterized protein; n=1;
           Azotobacter vinelandii AvOP|Rep: Putative
           uncharacterized protein - Azotobacter vinelandii AvOP
          Length = 213

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +3

Query: 48  APLNTPAGPTPASRCRPPTL 107
           AP+ +P+G  P+SRC+P T+
Sbjct: 133 APIGSPSGVVPSSRCQPATM 152


>UniRef50_UPI0000E87C7B Cluster: Pyrrolo-quinoline quinone; n=1;
           Methylophilales bacterium HTCC2181|Rep:
           Pyrrolo-quinoline quinone - Methylophilales bacterium
           HTCC2181
          Length = 581

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 127 SALHAGSGESLWLCYVNSQVN 189
           SA+H GSGE LW   +N+ VN
Sbjct: 523 SAVHGGSGEMLWSTKINAGVN 543


>UniRef50_UPI0000DB6B2A Cluster: PREDICTED: similar to CG9619-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG9619-PA
           - Apis mellifera
          Length = 828

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = -3

Query: 271 GVRFGTARRDSACALHPSALDRRTLFP 191
           G R+  +RR SACA+ P  LD RTL P
Sbjct: 653 GARYVESRRGSACAIPPRKLD-RTLVP 678


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,857,171
Number of Sequences: 1657284
Number of extensions: 3495311
Number of successful extensions: 12223
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12213
length of database: 575,637,011
effective HSP length: 71
effective length of database: 457,969,847
effective search space used: 10075336634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)