Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D02
(282 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF385590-1|AAK68115.1| 474|Homo sapiens m4 muscarinic cholinerg... 31 0.90
X15265-1|CAA33336.1| 479|Homo sapiens muscarinic acetylcholine ... 29 2.7
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 29 2.7
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 29 2.7
M16405-1|AAA51571.2| 479|Homo sapiens muscarinic acetylcholine ... 29 2.7
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 29 2.7
BC119817-1|AAI19818.1| 478|Homo sapiens CHRM4 protein protein. 29 2.7
BC119775-1|AAI19776.1| 478|Homo sapiens CHRM4 protein protein. 29 2.7
BC095546-1|AAH95546.1| 479|Homo sapiens CHRM4 protein protein. 29 2.7
AF498918-1|AAM18941.1| 479|Homo sapiens muscarinic acetylcholin... 29 2.7
BC126402-1|AAI26403.1| 867|Homo sapiens E2F transcription facto... 29 3.6
BC126400-1|AAI26401.1| 867|Homo sapiens E2F transcription facto... 29 3.6
BC090877-1|AAH90877.1| 575|Homo sapiens E2F8 protein protein. 29 3.6
>AF385590-1|AAK68115.1| 474|Homo sapiens m4 muscarinic cholinergic
receptor protein.
Length = 474
Score = 30.7 bits (66), Expect = 0.90
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 160 WLCYVNSQVNEERVYAGRAPRDAKRTRYHAALCQTSR 270
WLCYVNS +N YA K+T H LCQ +R
Sbjct: 440 WLCYVNSTIN-PACYA-LCNATFKKTFRHLLLCQYAR 474
>X15265-1|CAA33336.1| 479|Homo sapiens muscarinic acetylcholine
receptor M4 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 160 WLCYVNSQVNEERVYAGRAPRDAKRTRYHAALCQ 261
WLCYVNS +N YA K+T H LCQ
Sbjct: 440 WLCYVNSTIN-PACYA-LCNATFKKTFRHLLLCQ 471
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 15 PQPPVS*ACNLAPLNTPAGPTPASRCRPPT 104
P PP + L P TP+ PT + PPT
Sbjct: 781 PSPPPTTTTTLPPTTTPSPPTTTTTTPPPT 810
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 15 PQPPVS*ACNLAPLNTPAGPTPASRCRPPT 104
P PP + L P TP+ PT + PPT
Sbjct: 64 PSPPPTSTTTLPPTTTPSPPTTTTTTPPPT 93
>M16405-1|AAA51571.2| 479|Homo sapiens muscarinic acetylcholine
receptor m4 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 160 WLCYVNSQVNEERVYAGRAPRDAKRTRYHAALCQ 261
WLCYVNS +N YA K+T H LCQ
Sbjct: 440 WLCYVNSTIN-PACYA-LCNATFKKTFRHLLLCQ 471
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 15 PQPPVS*ACNLAPLNTPAGPTPASRCRPPT 104
P PP + L P TP+ PT + PPT
Sbjct: 1406 PSPPPTTTTTLPPTTTPSPPTTTTTTPPPT 1435
>BC119817-1|AAI19818.1| 478|Homo sapiens CHRM4 protein protein.
Length = 478
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 160 WLCYVNSQVNEERVYAGRAPRDAKRTRYHAALCQ 261
WLCYVNS +N YA K+T H LCQ
Sbjct: 439 WLCYVNSTIN-PACYA-LCNATFKKTFRHLLLCQ 470
>BC119775-1|AAI19776.1| 478|Homo sapiens CHRM4 protein protein.
Length = 478
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 160 WLCYVNSQVNEERVYAGRAPRDAKRTRYHAALCQ 261
WLCYVNS +N YA K+T H LCQ
Sbjct: 439 WLCYVNSTIN-PACYA-LCNATFKKTFRHLLLCQ 470
>BC095546-1|AAH95546.1| 479|Homo sapiens CHRM4 protein protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 160 WLCYVNSQVNEERVYAGRAPRDAKRTRYHAALCQ 261
WLCYVNS +N YA K+T H LCQ
Sbjct: 440 WLCYVNSTIN-PACYA-LCNATFKKTFRHLLLCQ 471
>AF498918-1|AAM18941.1| 479|Homo sapiens muscarinic acetylcholine
receptor M4 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 160 WLCYVNSQVNEERVYAGRAPRDAKRTRYHAALCQ 261
WLCYVNS +N YA K+T H LCQ
Sbjct: 440 WLCYVNSTIN-PACYA-LCNATFKKTFRHLLLCQ 471
>BC126402-1|AAI26403.1| 867|Homo sapiens E2F transcription factor 8
protein.
Length = 867
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 201 VRRSSAEGCKAHALSRRAVPNLT--PSMI 281
VRRSS E C + S R PN T PS+I
Sbjct: 370 VRRSSKENCAKNLFSTRGKPNFTRHPSLI 398
>BC126400-1|AAI26401.1| 867|Homo sapiens E2F transcription factor 8
protein.
Length = 867
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 201 VRRSSAEGCKAHALSRRAVPNLT--PSMI 281
VRRSS E C + S R PN T PS+I
Sbjct: 370 VRRSSKENCAKNLFSTRGKPNFTRHPSLI 398
>BC090877-1|AAH90877.1| 575|Homo sapiens E2F8 protein protein.
Length = 575
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 201 VRRSSAEGCKAHALSRRAVPNLT--PSMI 281
VRRSS E C + S R PN T PS+I
Sbjct: 78 VRRSSKENCAKNLFSTRGKPNFTRHPSLI 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,511,447
Number of Sequences: 237096
Number of extensions: 592243
Number of successful extensions: 1943
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1943
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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