Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_D02
         (282 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   2.9  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    20   6.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    20   6.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   6.7  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    19   8.8  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    19   8.8  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 63  PAGPTPASRCR 95
           P GPTPA + R
Sbjct: 385 PPGPTPAQKAR 395


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 160 WLCYVNSQVN 189
           WL YVNS +N
Sbjct: 368 WLGYVNSALN 377


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 160 WLCYVNSQVN 189
           WL YVNS +N
Sbjct: 368 WLGYVNSALN 377


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 160 WLCYVNSQVN 189
           WL YVNS +N
Sbjct: 368 WLGYVNSALN 377


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 259 GTARRDSACALHPSA 215
           G  R  S C+ HP+A
Sbjct: 112 GGCRNFSTCSSHPTA 126


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 259 GTARRDSACALHPSA 215
           G  R  S C+ HP+A
Sbjct: 111 GGCRNFSTCSSHPTA 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,588
Number of Sequences: 438
Number of extensions: 848
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)