Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_D01
(505 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 110 9e-25
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 110 9e-25
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 110 9e-25
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 107 8e-24
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 105 3e-23
AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p pro... 101 4e-22
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 101 4e-22
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 101 4e-22
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 85 7e-17
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 77 1e-14
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 69 4e-12
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 68 8e-12
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 58 5e-09
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 57 1e-08
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 55 6e-08
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 51 1e-06
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 45 5e-05
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 43 2e-04
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 42 6e-04
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 42 6e-04
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 42 6e-04
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 42 6e-04
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 42 6e-04
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 42 6e-04
X15707-1|CAA33737.1| 267|Drosophila melanogaster protein ( Dros... 39 0.004
X07656-2|CAA30503.1| 982|Drosophila melanogaster protein ( Dros... 38 0.006
AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA... 38 0.006
BT001400-1|AAN71155.1| 733|Drosophila melanogaster GH06606p pro... 33 0.22
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 33 0.22
X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical p... 31 0.89
X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical p... 31 0.89
X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein ( Dros... 31 0.89
X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprot... 31 0.89
BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p pro... 31 0.89
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ... 31 0.89
AF145629-1|AAD38604.1| 985|Drosophila melanogaster BcDNA.GH0558... 31 0.89
AE013599-714|AAM68837.1| 985|Drosophila melanogaster CG8740-PC,... 31 0.89
AE013599-713|AAM68836.1| 985|Drosophila melanogaster CG8740-PB,... 31 0.89
AE013599-712|AAF59045.1| 985|Drosophila melanogaster CG8740-PA,... 31 0.89
AY061311-1|AAL28859.1| 313|Drosophila melanogaster LD23129p pro... 30 2.0
AE014298-1349|AAF46509.2| 313|Drosophila melanogaster CG3004-PA... 30 2.0
AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase pr... 29 4.7
BT022354-1|AAY54770.1| 81|Drosophila melanogaster IP05048p pro... 28 8.3
AL138972-1|CAB72284.1| 1035|Drosophila melanogaster EG:BACR25B3.... 28 8.3
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE... 28 8.3
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 110 bits (265), Expect = 9e-25
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS-NG 189
Y W N+ K + + R C CQ++K T+HTK+P+ P F V VD IGPLP S NG
Sbjct: 923 YYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETPEHAFDRVVVDTIGPLPKSENG 982
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 369
+Y +T + T++ I + + A+TVAKA +I ++G + TD G ++++ +
Sbjct: 983 NEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMGTEYKNSIIT 1042
Query: 370 ELSKLTGSRHISTTAYHPAANGLVERIHRQLKAAI 474
+L K ++I++TA+H G+VER HR L I
Sbjct: 1043 DLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYI 1077
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent DNA
polymerase protein.
Length = 1000
Score = 110 bits (265), Expect = 9e-25
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS-NG 189
Y W N+ K + + R C CQ++K T+HTK+P+ P F V VD IGPLP S NG
Sbjct: 686 YYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETPEHAFDRVVVDTIGPLPKSENG 745
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 369
+Y +T + T++ I + + A+TVAKA +I ++G + TD G ++++ +
Sbjct: 746 NEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMGTEYKNSIIT 805
Query: 370 ELSKLTGSRHISTTAYHPAANGLVERIHRQLKAAI 474
+L K ++I++TA+H G+VER HR L I
Sbjct: 806 DLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYI 840
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 110 bits (265), Expect = 9e-25
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS-NG 189
Y W N+ K + + R C CQ++K T+HTK+P+ P F V VD IGPLP S NG
Sbjct: 74 YYWKNMSKYIKEYVRKCQKCQKAKTTKHTKTPMTITETPEHAFDRVVVDTIGPLPKSENG 133
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 369
+Y +T + T++ I + + A+TVAKA +I ++G + TD G ++++ +
Sbjct: 134 NEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFITDMGTEYKNSIIT 193
Query: 370 ELSKLTGSRHISTTAYHPAANGLVERIHRQLKAAI 474
+L K ++I++TA+H G+VER HR L I
Sbjct: 194 DLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYI 228
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 107 bits (257), Expect = 8e-24
Identities = 51/147 (34%), Positives = 87/147 (59%), Gaps = 1/147 (0%)
Frame = +1
Query: 19 WPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS-NGFK 195
WP + K + TC+ CQ+SK T+HTK+P+ P + F V +D IGPLP S NG +
Sbjct: 312 WPRMTKAISEYVETCLKCQQSKTTKHTKTPLTITETPATAFDIVLIDTIGPLPRSENGNE 371
Query: 196 YCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFKEL 375
Y +T + T++ + + + A++VAKA ++I ++G + I TD G ++++ + +L
Sbjct: 372 YAVTIICDLTKYLVTVPIPNKSAKSVAKAVFENFILKYGPMKTIITDMGTEYKNQIIDDL 431
Query: 376 SKLTGSRHISTTAYHPAANGLVERIHR 456
K ++I++TA+H G +ER HR
Sbjct: 432 CKYMKIKNITSTAHHHQTLGTIERSHR 458
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 105 bits (253), Expect = 3e-23
Identities = 50/149 (33%), Positives = 86/149 (57%), Gaps = 1/149 (0%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS-NG 189
Y WP + K + +TC+ CQ++K+T HTK+P+ P + F V +D IGPLP S +G
Sbjct: 681 YYWPQMTKTISKYVKTCLKCQQAKITTHTKTPLTLMPTPATAFDTVLIDTIGPLPKSEDG 740
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 369
+Y +T + T++ I + A+TVAKA ++ ++G + TD+G ++++ L
Sbjct: 741 NEYAVTIICDLTKFLVTIPTPNKSAKTVAKAIFELFVLKYGPMKTFITDQGTEYKNSLMN 800
Query: 370 ELSKLTGSRHISTTAYHPAANGLVERIHR 456
EL K +++++A+H G +ER HR
Sbjct: 801 ELCKYMHIENLTSSAHHHQTLGTIERSHR 829
>AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p
protein.
Length = 370
Score = 101 bits (243), Expect = 4e-22
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPISN-G 189
Y W N+ + + + R C CQ SK T HTK+P+ PT+ F V VD +GPLP S G
Sbjct: 56 YYWKNMTRHIKEYIRRCHKCQMSKTTTHTKTPLTYTETPTNAFDIVIVDTVGPLPKSEYG 115
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 369
+Y +T + T++ I + + A TVAKA ++I ++G + +D G ++++ + +
Sbjct: 116 NEYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFISDMGTEYKNNVIQ 175
Query: 370 ELSKLTGSRHISTTAYHPAANGLVERIHR 456
++ K ++++TAYH G +ER HR
Sbjct: 176 DMCKYMKIENLTSTAYHHQTLGTIERSHR 204
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 101 bits (243), Expect = 4e-22
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPISN-G 189
Y W N+ + + + R C CQ SK T HTK+P+ PT+ F V VD +GPLP S G
Sbjct: 512 YYWKNMTRHIKEYIRRCHKCQMSKTTTHTKTPLTYTETPTNAFDIVIVDTVGPLPKSEYG 571
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 369
+Y +T + T++ I + + A TVAKA ++I ++G + +D G ++++ + +
Sbjct: 572 NEYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFISDMGTEYKNNVIQ 631
Query: 370 ELSKLTGSRHISTTAYHPAANGLVERIHR 456
++ K ++++TAYH G +ER HR
Sbjct: 632 DMCKYMKIENLTSTAYHHQTLGTIERSHR 660
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 101 bits (243), Expect = 4e-22
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPISN-G 189
Y W N+ + + + R C CQ SK T HTK+P+ PT+ F V VD +GPLP S G
Sbjct: 512 YYWKNMTRHIKEYIRRCHKCQMSKTTTHTKTPLTYTETPTNAFDIVIVDTVGPLPKSEYG 571
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 369
+Y +T + T++ I + + A TVAKA ++I ++G + +D G ++++ + +
Sbjct: 572 NEYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFISDMGTEYKNNVIQ 631
Query: 370 ELSKLTGSRHISTTAYHPAANGLVERIHR 456
++ K ++++TAYH G +ER HR
Sbjct: 632 DMCKYMKIENLTSTAYHHQTLGTIERSHR 660
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 84.6 bits (200), Expect = 7e-17
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Frame = +1
Query: 10 RYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS-N 186
RY WP + + R + R C C K ++ + P ++ V D +GPLP S +
Sbjct: 119 RYYWPGMHRGVRKYVRNCECCMMYKPSQLQAAGKMLTQVPEEPWATVCADFVGPLPRSKH 178
Query: 187 GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLF 366
G L VDRF++W E++ + ET+ KA ++R+G P+ + TD Q F
Sbjct: 179 GNSMLLVLVDRFSKWTEIVPMRRATTETMRKAVRERIVARYGVPKVMITDNNVQLTIRAF 238
Query: 367 KELSKLTGSRHISTTAYHPAANGLVERIHRQLKAAI 474
++ + G RH T Y P N ER +R +K I
Sbjct: 239 RKFLEELGVRHQLTAPYTPQENP-TERANRTVKTMI 273
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 77.4 bits (182), Expect = 1e-14
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDC-QRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPISNG 189
Y +PN+++ C C+ C S T T+ +H F +H+D GP+ ++
Sbjct: 1225 YWFPNLKQKCSTHISNCLKCISFSPKTGKTEGFLHNIPKGNKPFEIIHIDHYGPVDLARP 1284
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 369
K+ L VD FT++ + A + + V ++ + D+ + P+ I +DRG F S F
Sbjct: 1285 KKHILVIVDAFTKFVRLYATKTTNTKEVIQS-LNDYFRAYSRPKCIISDRGACFTSGDFD 1343
Query: 370 ELSKLTGSRHISTTAYHPAANGLVERIHRQL 462
K +HI P ANG VERI+R L
Sbjct: 1344 SFLKECNVKHIKIATGSPQANGQVERINRSL 1374
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 68.9 bits (161), Expect = 4e-12
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Frame = +1
Query: 148 VHVDIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQK 324
+H+D +GP+ S +KY L VD F+++ + + E V K + DW + FG P++
Sbjct: 1041 LHIDHLGPMDSSAKQYKYILATVDAFSKFVWLFPTKSTGQEEVVKR-LTDWSNIFGFPKR 1099
Query: 325 ITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERIHRQLKAAI-MCQSDQ--N 495
I +D+G F S F++ H+ TT NG +ER++R + A I SD+
Sbjct: 1100 IVSDKGTAFTSGAFEQFMSSHNVEHVCTTTGVARGNGQIERVNRLILAIISKLSSDEPSK 1159
Query: 496 WYE 504
WY+
Sbjct: 1160 WYK 1162
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 67.7 bits (158), Expect = 8e-12
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +1
Query: 22 PNIRKDCRLWTRTCVDCQ-RSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS-NGFK 195
P++ + C+ C SK + ++ + +H+D +GP+ S +K
Sbjct: 691 PHLEYKVKKLISNCIKCIIHSKKLGKQEGYLNCIDKGDAPLHTLHIDHLGPMDSSAKQYK 750
Query: 196 YCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFKEL 375
Y L VD F+++ + + E V K + DW + FG P++I +D+G F S F++
Sbjct: 751 YILATVDAFSKFVWLFPTKSTGQEEVVKR-LTDWSNIFGFPKRIVSDKGTAFTSGAFEQF 809
Query: 376 SKLTGSRHISTTAYHPAANGLVERIHRQLKAAIMCQ--SDQ--NWYE 504
H+ TT NG +ER++R L AI+ + SD+ WY+
Sbjct: 810 MSSHNVEHVCTTTGVARGNGQIERVNR-LNLAIISKLSSDEPSKWYK 855
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 58.4 bits (135), Expect = 5e-09
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Frame = +1
Query: 19 WPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP--PTSRFSHVHVDIIGPLPISNGF 192
+PN++ R C C + K R ++ V TP P+ +H+DI I+N F
Sbjct: 886 FPNMKNKISELIRNCETCLKLKYDRQPQNIVFE-TPETPSKPLDIIHIDIY---TINNNF 941
Query: 193 KYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFKE 372
LT +D+F+++ V + + KA I+++ S+FG P+K+ D+G +F + +F++
Sbjct: 942 N--LTIIDKFSKFAAVYPIPNRNGINCIKA-IKNFFSQFGLPKKLIHDQGVEFCNDIFRK 998
Query: 373 L-SKLTGSRHISTTAYHPAANGLVERIHRQL 462
S+ H+ T+ ++N VER+H L
Sbjct: 999 FCSQYNILLHV-TSFQQSSSNSPVERLHSSL 1028
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 57.2 bits (132), Expect = 1e-08
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 2/159 (1%)
Frame = +1
Query: 10 RYVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISN 186
R +P +RK C+ C+ +K RH P TP P +H+DI S
Sbjct: 776 RVYFPKMRKKVSAIVNQCLVCKTAKYDRHPTHPEIRQTPLPEYPGQIIHIDIY-----ST 830
Query: 187 GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLF 366
LTA+D+F++ ++ E + KA +RD + +G P+ I D + S
Sbjct: 831 ERHLVLTAIDKFSKLAMGRVIKSKAVEDIRKA-LRDIVFYYGVPKLIVMDNEKSLNSASI 889
Query: 367 K-ELSKLTGSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
K L+ G Y NG +ER H L + C
Sbjct: 890 KFMLTDQLGIELYKAPPYKSTVNGQIERFHSTLSEIMRC 928
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Frame = +1
Query: 19 WPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNGFK 195
+P++++ R C C + K R + + + P+ +H+DI +
Sbjct: 775 FPHMKERITQLIRKCETCLKLKYDRQPQKITYQISELPSKPLDILHIDIY-----TINKN 829
Query: 196 YCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLF-KE 372
Y LT +D+F+++ + + V KA ++ +IS+FG P+K+ D+G +F S +F K
Sbjct: 830 YNLTIIDKFSKFAAAYPITNRNCINVVKA-LKHFISQFGIPKKLIYDQGAEFASDMFNKF 888
Query: 373 LSKLTGSRHISTTAYHPAANGLVERIHRQL 462
++ H+ T+ ++N VER+H L
Sbjct: 889 CTQFNIDLHV-TSFQQSSSNSPVERLHSTL 917
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 50.8 bits (116), Expect = 1e-06
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 2/158 (1%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNG 189
Y +P + + + C+ CQ++K RH + + TP P+ +H+DI S G
Sbjct: 770 YFFPKMSQIAATFVSNCLVCQKAKYDRHPQKQILGRTPIPSHVGETLHIDI-----FSTG 824
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 369
Y LT +D+F+++ V + + T + I ++ F + I D S K
Sbjct: 825 RNYFLTCIDKFSKFAIVQPIGS-RTITDLEPAIMQLMNFFPHSKTIFCDNEPSINSESIK 883
Query: 370 ELSKLTGSRHISTT-AYHPAANGLVERIHRQLKAAIMC 480
L K + I+ H +NG VER H L C
Sbjct: 884 SLLKNRFNVDIANAPPLHSTSNGQVERFHSTLLEIARC 921
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 1013
Score = 45.2 bits (102), Expect = 5e-05
Identities = 43/158 (27%), Positives = 63/158 (39%), Gaps = 2/158 (1%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNG 189
Y +P + K C C ++K RH K TP PT +H+DI S
Sbjct: 742 YYFPKMTKLASEIAANCKTCAKAKYDRHPKKQELGETPVPTHVGEILHIDIF-----STD 796
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESY-LF 366
KY LT VD+F+++ V + E + KA + ++ F + I D +S +
Sbjct: 797 KKYFLTCVDKFSKFAMVQPILSRTIEDL-KAPLLQLMNVFPKAKTIYCDNEPSLKSQTIV 855
Query: 367 KELSKLTGSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
L G + H +NG VER H L C
Sbjct: 856 AMLENHFGVSISNAPPLHSVSNGQVERFHSTLIELARC 893
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 43.2 bits (97), Expect = 2e-04
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNG 189
Y +P + + C C ++K RH K TP P+ VH+DI S
Sbjct: 744 YYFPKMGSLAKEVVANCRVCTQAKYDRHPKKQELGETPIPSYTGEMVHIDIF-----STD 798
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYL 363
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 799 RKLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSET 855
Query: 364 FKELSKLT-GSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
+ K T G ++ H ++NG VER H L C
Sbjct: 856 VTSMLKNTFGIDIVNAPPLHSSSNGQVERFHSTLAEIARC 895
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNG 189
Y +P + + C C ++K RH K TP P+ VH+DI S
Sbjct: 739 YYFPKMGSLAKEVVANCRVCTQAKYDRHPKKQELGETPIPSYTGEMVHIDIF-----STD 793
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYL 363
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 794 RKLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSET 850
Query: 364 FKELSKLT-GSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
+ K + G ++ H ++NG VER H L C
Sbjct: 851 VTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARC 890
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNG 189
Y +P + + C C ++K RH K TP P+ VH+DI S
Sbjct: 774 YYFPKMGSLAKEVVANCRVCTQAKYDRHPKKQELGETPIPSYTGEMVHIDIF-----STD 828
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYL 363
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 829 RKLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSET 885
Query: 364 FKELSKLT-GSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
+ K + G ++ H ++NG VER H L C
Sbjct: 886 VTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARC 925
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNG 189
Y +P + + C C ++K RH K TP P+ VH+DI S
Sbjct: 774 YYFPKMGSLAKEVVANCRVCTQAKYDRHPKKQELGETPIPSYTGEMVHIDIF-----STD 828
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYL 363
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 829 RKLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSET 885
Query: 364 FKELSKLT-GSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
+ K + G ++ H ++NG VER H L C
Sbjct: 886 VTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIASC 925
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNG 189
Y +P + + C C ++K RH K TP P+ VH+DI S
Sbjct: 739 YYFPKMGSLAKEVVANCRVCTQAKYDRHPKKQELGETPIPSYTGEMVHIDIF-----STD 793
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYL 363
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 794 RKLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSET 850
Query: 364 FKELSKLT-GSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
+ K + G ++ H ++NG VER H L C
Sbjct: 851 VTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARC 890
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNG 189
Y +P + + C C ++K RH K TP P+ VH+DI S
Sbjct: 739 YYFPKMGSLAKEVVANCRVCTQAKYDRHPKKQELGETPIPSYTGEMVHIDIF-----STD 793
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYL 363
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 794 RKLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSET 850
Query: 364 FKELSKLT-GSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
+ K + G ++ H ++NG VER H L C
Sbjct: 851 VTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARC 890
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Frame = +1
Query: 13 YVWPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTP-PTSRFSHVHVDIIGPLPISNG 189
Y +P + + C C ++K RH K TP P+ VH+DI S
Sbjct: 1192 YYFPKMGSLAKEVVANCRVCTQAKYDRHPKKQELGETPIPSYTGEMVHIDIF-----STD 1246
Query: 190 FKYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYL 363
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 1247 RKLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSET 1303
Query: 364 FKELSKLT-GSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
+ K + G ++ H ++NG VER H L C
Sbjct: 1304 VTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARC 1343
>X15707-1|CAA33737.1| 267|Drosophila melanogaster protein (
Drosophila melanogasterDNA sequence (isolate CBS) for
18S rRNA (3'end), 5.8SrRNA and 28S rRNA (5'end). ).
Length = 267
Score = 38.7 bits (86), Expect = 0.004
Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 2/156 (1%)
Frame = +1
Query: 19 WPNIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHV-HVDIIGPLPISNGFK 195
+P + K C C ++K RH K TP S + H+DI S K
Sbjct: 22 FPKMTKLATEIVANCKTCAKAKYDRHPKQHELGETPIPSHVGELLHIDIF-----STDKK 76
Query: 196 YCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFKE- 372
Y LT +D+F+++ + E + A ++ ++ F + + D S+
Sbjct: 77 YFLTCIDKFSKFAIEQHVHSRTIEDLKPAILQI-MNFFPRARVVYCDNEPSLNSHTISTM 135
Query: 373 LSKLTGSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
L G + H +NG VER H L C
Sbjct: 136 LDNHFGVSIANAPPLHSVSNGQVERFHSTLLELARC 171
>X07656-2|CAA30503.1| 982|Drosophila melanogaster protein (
Drosophila melanogasterretrotransposon 1731 sequence. ).
Length = 982
Score = 38.3 bits (85), Expect = 0.006
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Frame = +1
Query: 148 VHVDIIGPL--PISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFI--RDWISR-FG 312
+H D+ GP P G KY LT +D +R V L K + V F+ + + R G
Sbjct: 202 IHSDLCGPFSTPSLAGSKYFLTFIDDKSRRIFVYFLR--KKDEVFTKFVEFKKLVERQTG 259
Query: 313 CPQK-ITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERIHRQLKAAIMC 480
K I +D G +F + +F + K G T + P NG+ ER +R L C
Sbjct: 260 RKIKCIRSDNGGEFVNNVFDDYLKAHGIARQLTIPHTPQQNGVAERANRTLVEMARC 316
>AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA
protein.
Length = 131
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +1
Query: 211 VDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFKELSKLTG 390
VD F+++ E V R ++ FG P +I +DRG F S+LFKE +
Sbjct: 20 VDAFSKYVWFYPTRSTGVEEVLNCIERQALN-FGKPFRIVSDRGAAFTSHLFKEYYEKHQ 78
Query: 391 SRHISTTAYHPAANG 435
RH+ P NG
Sbjct: 79 IRHLLIPTGVPLGNG 93
>BT001400-1|AAN71155.1| 733|Drosophila melanogaster GH06606p
protein.
Length = 733
Score = 33.1 bits (72), Expect = 0.22
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +1
Query: 139 FSHVHVDIIGPLPISNGF-KYCLTA---VDRFTRWP-EVIALE---DIKAETVAKAFIRD 294
F++ +D GP I N + CL V F + + I LE D+ E AF R
Sbjct: 425 FTYTGIDYAGPFEIKNYTGRACLITKGYVCVFVCFSTKAIHLEPTSDLTTEKFLAAFAR- 483
Query: 295 WISRFGCPQKITTDRGRQF 351
+++R GCPQ++ +D G+ F
Sbjct: 484 FVARRGCPQRVHSDNGKTF 502
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 33.1 bits (72), Expect = 0.22
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +1
Query: 139 FSHVHVDIIGPLPISNGF-KYCLTA---VDRFTRWP-EVIALE---DIKAETVAKAFIRD 294
F++ +D GP I N + CL V F + + I LE D+ E AF R
Sbjct: 1522 FTYTGIDYAGPFEIKNYTGRACLITKGYVCVFVCFSTKAIHLEPTSDLTTEKFLAAFAR- 1580
Query: 295 WISRFGCPQKITTDRGRQF 351
+++R GCPQ++ +D G+ F
Sbjct: 1581 FVARRGCPQRVHSDNGKTF 1599
>X04456-2|CAD27357.1| 1017|Drosophila melanogaster hypothetical
protein protein.
Length = 1017
Score = 31.1 bits (67), Expect = 0.89
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +1
Query: 148 VHVDIIGPL-PISNGFK-YCLTAVDRFTRWPEVIALEDIKAETVA--KAFIRDWISRFGC 315
VH D+ GP+ P++ K Y + VD+FT + V L K++ + + F+ + F
Sbjct: 92 VHSDVCGPITPVTLDDKNYFVIFVDQFTHYC-VTYLIKYKSDVFSMFQDFVAKSEAHFNL 150
Query: 316 PQK-ITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERIHRQL 462
+ D GR++ S ++ G + T + P NG+ ER+ R +
Sbjct: 151 KVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 200
>X04456-1|CAA28054.2| 1409|Drosophila melanogaster hypothetical
protein protein.
Length = 1409
Score = 31.1 bits (67), Expect = 0.89
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +1
Query: 148 VHVDIIGPL-PISNGFK-YCLTAVDRFTRWPEVIALEDIKAETVA--KAFIRDWISRFGC 315
VH D+ GP+ P++ K Y + VD+FT + V L K++ + + F+ + F
Sbjct: 484 VHSDVCGPITPVTLDDKNYFVIFVDQFTHYC-VTYLIKYKSDVFSMFQDFVAKSEAHFNL 542
Query: 316 PQK-ITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERIHRQL 462
+ D GR++ S ++ G + T + P NG+ ER+ R +
Sbjct: 543 KVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
>X02600-1|CAA26447.1| 1288|Drosophila melanogaster protein (
Drosophila melanogastervirus like particle RNA (VLP
H-RNA). ).
Length = 1288
Score = 31.1 bits (67), Expect = 0.89
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +1
Query: 148 VHVDIIGPL-PISNGFK-YCLTAVDRFTRWPEVIALEDIKAETVA--KAFIRDWISRFGC 315
VH D+ GP+ P++ K Y + VD+FT + V L K++ + + F+ + F
Sbjct: 484 VHSDVCGPITPVTLDDKNYFVIFVDQFTHYC-VTYLIKYKSDVFSMFQDFVAKSEAHFNL 542
Query: 316 PQK-ITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERIHRQL 462
+ D GR++ S ++ G + T + P NG+ ER+ R +
Sbjct: 543 KVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
>X02599-1|CAA26444.1| 1409|Drosophila melanogaster 31 KD polyprotein
protein.
Length = 1409
Score = 31.1 bits (67), Expect = 0.89
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +1
Query: 148 VHVDIIGPL-PISNGFK-YCLTAVDRFTRWPEVIALEDIKAETVA--KAFIRDWISRFGC 315
VH D+ GP+ P++ K Y + VD+FT + V L K++ + + F+ + F
Sbjct: 484 VHSDVCGPITPVTLDDKNYFVIFVDQFTHYC-VTYLIKYKSDVFSMFQDFVAKSEAHFNL 542
Query: 316 PQK-ITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERIHRQL 462
+ D GR++ S ++ G + T + P NG+ ER+ R +
Sbjct: 543 KVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
>BT011428-1|AAR99086.1| 1409|Drosophila melanogaster SD14423p
protein.
Length = 1409
Score = 31.1 bits (67), Expect = 0.89
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +1
Query: 148 VHVDIIGPL-PISNGFK-YCLTAVDRFTRWPEVIALEDIKAETVA--KAFIRDWISRFGC 315
VH D+ GP+ P++ K Y + VD+FT + V L K++ + + F+ + F
Sbjct: 484 VHSDVCGPITPVTLDDKNYFVIFVDQFTHYC-VTYLIKYKSDVFSMFQDFVAKSEAHFNL 542
Query: 316 PQK-ITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERIHRQL 462
+ D GR++ S ++ G + T + P NG+ ER+ R +
Sbjct: 543 KVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTI 592
>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
protein.
Length = 1571
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 196 YCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQF 351
Y L V T+ + D+ E AF R ++SR GCP+++ +D G+ F
Sbjct: 1442 YVLVFVCFSTKAIHLEPTSDLTTEKFLAAFSR-FVSRRGCPRQVQSDNGKTF 1492
>AF145629-1|AAD38604.1| 985|Drosophila melanogaster BcDNA.GH05582
protein.
Length = 985
Score = 31.1 bits (67), Expect = 0.89
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 166 GPLPISNGFKYCLTAVDRFTRWPEVIALEDIKA-ETVAKAFIRDWISRFGCPQKITTDRG 342
G I N F+ D TRW + L+DI+A E+ + RD + ++ R
Sbjct: 346 GDSGIENDFRKESFNGDLTTRWRKRTVLDDIRACESFLRKERRDSAQQRQFQRQAVPSRL 405
Query: 343 RQFESYLFKELSKLTGSRHISTTAYHPAANGLVER 447
R+ SY+++E S GS +P A + R
Sbjct: 406 RREHSYVYRERSIDDGSHFDPHLDKYPVATSTLRR 440
>AE013599-714|AAM68837.1| 985|Drosophila melanogaster CG8740-PC,
isoform C protein.
Length = 985
Score = 31.1 bits (67), Expect = 0.89
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 166 GPLPISNGFKYCLTAVDRFTRWPEVIALEDIKA-ETVAKAFIRDWISRFGCPQKITTDRG 342
G I N F+ D TRW + L+DI+A E+ + RD + ++ R
Sbjct: 346 GDSGIENDFRKESFNGDLTTRWRKRTVLDDIRACESFLRKERRDSAQQRQFQRQAVPSRL 405
Query: 343 RQFESYLFKELSKLTGSRHISTTAYHPAANGLVER 447
R+ SY+++E S GS +P A + R
Sbjct: 406 RREHSYVYRERSIDDGSHFDPHLDKYPVATSTLRR 440
>AE013599-713|AAM68836.1| 985|Drosophila melanogaster CG8740-PB,
isoform B protein.
Length = 985
Score = 31.1 bits (67), Expect = 0.89
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 166 GPLPISNGFKYCLTAVDRFTRWPEVIALEDIKA-ETVAKAFIRDWISRFGCPQKITTDRG 342
G I N F+ D TRW + L+DI+A E+ + RD + ++ R
Sbjct: 346 GDSGIENDFRKESFNGDLTTRWRKRTVLDDIRACESFLRKERRDSAQQRQFQRQAVPSRL 405
Query: 343 RQFESYLFKELSKLTGSRHISTTAYHPAANGLVER 447
R+ SY+++E S GS +P A + R
Sbjct: 406 RREHSYVYRERSIDDGSHFDPHLDKYPVATSTLRR 440
>AE013599-712|AAF59045.1| 985|Drosophila melanogaster CG8740-PA,
isoform A protein.
Length = 985
Score = 31.1 bits (67), Expect = 0.89
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 166 GPLPISNGFKYCLTAVDRFTRWPEVIALEDIKA-ETVAKAFIRDWISRFGCPQKITTDRG 342
G I N F+ D TRW + L+DI+A E+ + RD + ++ R
Sbjct: 346 GDSGIENDFRKESFNGDLTTRWRKRTVLDDIRACESFLRKERRDSAQQRQFQRQAVPSRL 405
Query: 343 RQFESYLFKELSKLTGSRHISTTAYHPAANGLVER 447
R+ SY+++E S GS +P A + R
Sbjct: 406 RREHSYVYRERSIDDGSHFDPHLDKYPVATSTLRR 440
>AY061311-1|AAL28859.1| 313|Drosophila melanogaster LD23129p
protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 GRYVWP-NIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS 183
GRY+ N + +C +W+ T D + S + + K P H+ +FS D L S
Sbjct: 177 GRYLAAANNKGNCYIWSLTSQDQKMSTLRPNRKIPAHSRYILRCKFS---PDSRLLLTTS 233
Query: 184 NGFKYCLTAVDRFTRWPEV 240
C+ D F++W E+
Sbjct: 234 GDGTVCIWKTDDFSKWREL 252
>AE014298-1349|AAF46509.2| 313|Drosophila melanogaster CG3004-PA
protein.
Length = 313
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 7 GRYVWP-NIRKDCRLWTRTCVDCQRSKVTRHTKSPVHAFTPPTSRFSHVHVDIIGPLPIS 183
GRY+ N + +C +W+ T D + S + + K P H+ +FS D L S
Sbjct: 177 GRYLAAANNKGNCYIWSLTSQDQKMSTLRPNRKIPAHSRYILRCKFS---PDSRLLLTTS 233
Query: 184 NGFKYCLTAVDRFTRWPEV 240
C+ D F++W E+
Sbjct: 234 GDGTVCIWKTDDFSKWREL 252
>AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase
protein.
Length = 120
Score = 28.7 bits (61), Expect = 4.7
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
Frame = +1
Query: 121 TP-PTSRFSHVHVDIIGPLPISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIR 291
TP P+ VH+DI S K LT +D+F+++ V + + + T+ A +
Sbjct: 7 TPIPSYTGEMVHIDIF-----STDRKLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLL 58
Query: 292 DWISRFGCPQKITTDRGRQFESYLFKELSKLT-GSRHISTTAYHPAANGLVERIHRQL 462
I+ F + + D F S + K + G ++ H ++NG VER H L
Sbjct: 59 QIINLFPNIKTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTL 116
>BT022354-1|AAY54770.1| 81|Drosophila melanogaster IP05048p
protein.
Length = 81
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 29 YVKTADFGLVLVLTVSVQKLHATRSRQCMHLHHQRAD 139
Y+++ D LVL +++++H R LHH R +
Sbjct: 36 YLRSVDQFANLVLQRTIERIHVGRRHSSRSLHHSRGE 72
>AL138972-1|CAB72284.1| 1035|Drosophila melanogaster EG:BACR25B3.11
protein.
Length = 1035
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -3
Query: 266 SALISSKAMTSGQRVNRSTAVKQYLKPFEIGSGPIISTCT*ENLLVGGVNACT 108
S L S+K + SG R+ A+ +P + TC N++ G+ CT
Sbjct: 55 SKLSSAKPIISGPATTRAPAISYVCQPNDFKCVSHPHTCVRANMVCDGIYDCT 107
>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
isoform E protein.
Length = 4228
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -3
Query: 266 SALISSKAMTSGQRVNRSTAVKQYLKPFEIGSGPIISTCT*ENLLVGGVNACT 108
S L S+K + SG R+ A+ +P + TC N++ G+ CT
Sbjct: 3218 SKLSSAKPIISGPATTRAPAISYVCQPNDFKCVSHPHTCVRANMVCDGIYDCT 3270
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,701,988
Number of Sequences: 53049
Number of extensions: 445784
Number of successful extensions: 1333
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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