Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_C24
(491 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 244 6e-66
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 235 2e-63
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 126 2e-30
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 112 3e-26
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 32 0.041
SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces po... 31 0.12
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.12
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 28 0.88
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 27 1.2
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 27 1.5
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 2.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 2.7
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 25 4.7
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 25 6.2
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 25 6.2
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 6.2
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 25 8.2
SPBC3B9.09 |vps36||RBZ zinc finger protein Vps36|Schizosaccharom... 25 8.2
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 8.2
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 244 bits (597), Expect = 6e-66
Identities = 106/160 (66%), Positives = 128/160 (80%)
Frame = +2
Query: 11 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 190
MRE IS+HVGQAG QIGNACWELYCLEHGIQP+G M + D F+TFFSETG GK
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
Query: 191 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 370
+VPR+++VDLEP V+D+VRTG YR LFHPEQLITGKEDA+NNYARGHYT+GKE+VD V D
Sbjct: 61 YVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTD 120
Query: 371 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 490
+IR++AD C+GLQGFL+FH LL+ERL+++
Sbjct: 121 KIRRIADNCSGLQGFLVFHSFGGGTGSGFGALLLERLAME 160
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 235 bits (576), Expect = 2e-63
Identities = 107/165 (64%), Positives = 130/165 (78%), Gaps = 5/165 (3%)
Frame = +2
Query: 11 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD-----KTIGGGDDSFNTFFSE 175
MRE ISVHVGQAGVQIGNACWELYCLEHGI PDG PT+ K +D F TFFSE
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDG-FPTENSEVHKNNSYLNDGFGTFFSE 59
Query: 176 TGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV 355
TG GK VPR+++VDLEP V+D+VRTG Y+ LFHPEQ++TGKEDA+NNYARGHYT+GKE++
Sbjct: 60 TGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMI 119
Query: 356 DLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVD 490
D VL+RIR++AD C+GLQGFL+FH LL+ERL+++
Sbjct: 120 DSVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLERLNME 164
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 126 bits (304), Expect = 2e-30
Identities = 61/157 (38%), Positives = 86/157 (54%)
Frame = +2
Query: 11 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 190
MRE + + GQ G Q+G A W EHG+ G T + N +F+E GK
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIY--HGTSEAQHERLNVYFNEAAGGK 58
Query: 191 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 370
+VPRAV VDLEP +D V++G + LF P+ +I G+ A N +A+GHYT G E+ D VLD
Sbjct: 59 YVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLD 118
Query: 371 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 481
+R+ A+ C LQGF + H LL+ ++
Sbjct: 119 VVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSKI 155
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 112 bits (269), Expect = 3e-26
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Frame = +2
Query: 14 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 193
RE I++ GQ G QIG+ W+ CLEHGI PDG + + T G D + FF ++ ++
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFAT--EGVDRKDVFFYQSDDTRY 60
Query: 194 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 367
+PRA+ +DLEP VV+ + + TY L++PE ++ K A NN+A G Y+ + I + ++
Sbjct: 61 IPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIM 119
Query: 368 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLS 484
D I + AD L+GF + H L+ERL+
Sbjct: 120 DMIDREADGSDSLEGFSLLHSIAGGTGSGLGSFLLERLN 158
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 32.3 bits (70), Expect = 0.041
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Frame = +3
Query: 51 SRSEMPAGSCIALSTASNLM--VRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSIL 221
SRS P + ++S A+ Q+T P+ V + TP T SS L S+ P+ SSSIL
Sbjct: 346 SRSSKPTDTTNSISFANTTPENTSTQITSPTAVNSSTPITSSSV---LNSSTPITSSSIL 402
Query: 222 N-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVVTTPL 341
N +T S++ ++ + ++ L+ + +T+L +TP+
Sbjct: 403 NTSTPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPI 444
Score = 29.9 bits (64), Expect = 0.22
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S+S+ + P + S + S ++++S L +T + V + TP T S+A L ++
Sbjct: 1226 SSSVLNSSTPITSSSI-LNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTA---LNTS 1281
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 1282 IPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 1328
Score = 29.1 bits (62), Expect = 0.38
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S +L T S S + + + I STA N +T S + + TP T S+A L ++
Sbjct: 687 STALNTSTPITSSSVLNSSTAITSSTALNTST--PITSSSVLNSSTPITSSTA---LNTS 741
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 742 TPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNT 788
Score = 28.7 bits (61), Expect = 0.50
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALST--ASNLMVRCQLTRPSGVETTPSTRSSARPELAS 191
S + +L S + + + S + ST S+ +V S ST ++ L +
Sbjct: 2565 STPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 2624
Query: 192 TFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
+ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 2625 STPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 2672
Score = 28.3 bits (60), Expect = 0.66
Identities = 29/93 (31%), Positives = 42/93 (45%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 236
S P S AL+T++ + L +TP T SS L ++ P+ SSS+LN
Sbjct: 968 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSSV---LNTSTPITSSSVLNSSTA 1019
Query: 237 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
S+ A S I ++ L P T+ VV T
Sbjct: 1020 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1052
Score = 28.3 bits (60), Expect = 0.66
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF 197
S +L T S S + + + I STA N +T S + ++ + SS+ L S+
Sbjct: 3303 STTLNTSTPITSSSVLNSSTAITSSTALNTST--PITSSSVLNSSTAITSSSI--LNSST 3358
Query: 198 PVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 341
PV SSS+LN S+ S I ++ +L P T+ V+ +TP+
Sbjct: 3359 PVTSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 3408
Score = 27.9 bits (59), Expect = 0.88
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +3
Query: 18 SASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAS 191
S+S+ + P S S + + + I ST N +T + V + TP T S+A L +
Sbjct: 458 SSSVLNSSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNT 512
Query: 192 TFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
+ P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 513 STPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNT 560
Score = 27.9 bits (59), Expect = 0.88
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S+S+ + P + S + S ++++S L +T + V T TP T S+ + S+
Sbjct: 794 SSSVLNSSTPITSSTV-LNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV---VNSS 849
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
P+ SSS+LN S+ A S I ++ L P T+ VV T
Sbjct: 850 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 896
Score = 27.9 bits (59), Expect = 0.88
Identities = 29/93 (31%), Positives = 43/93 (46%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 236
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 1748 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 1799
Query: 237 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
S+ A S I ++ L P T+ VV T
Sbjct: 1800 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1832
Score = 27.9 bits (59), Expect = 0.88
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF 197
S+S+ + P + S + S +++++ L +T S + ++ + SS+ L S+
Sbjct: 3182 SSSIVNSSTPITSSSV-LNSSTPITSSTTLNTSTPITSSSVLNSSTAITSSS--VLNSST 3238
Query: 198 PVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
P+ SSS+LN +T S + +T S I ++ L P T+ VV T
Sbjct: 3239 PITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSSTVVNT 3284
Score = 27.5 bits (58), Expect = 1.2
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Frame = +3
Query: 18 SASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAS 191
S+S+ + P S S + + + I STA N +T S + + TP T S+A L +
Sbjct: 638 SSSVLNSSTPITSSSVLNSSTPITSSTALNTST--PITSSSVLNSSTPITSSTA---LNT 692
Query: 192 TFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 341
+ P+ SSS+LN S+ A S I ++ L P T T L +TP+
Sbjct: 693 STPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPI 744
Score = 27.5 bits (58), Expect = 1.2
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF-----PVPSSSIL 221
S P S AL+T++ + L + + T+ S +S+ P +ST P+ SSS+L
Sbjct: 2096 SSTPITSSTALNTSTPITSSSVLNSSTPI-TSSSVLNSSTPITSSTVVNSSTPITSSSVL 2154
Query: 222 NPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 341
N S+ A S I ++ L P T+ VV +TP+
Sbjct: 2155 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPI 2196
Score = 27.5 bits (58), Expect = 1.2
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 147 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 326
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2841 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2897
Query: 327 VTT 335
V T
Sbjct: 2898 VNT 2900
Score = 27.5 bits (58), Expect = 1.2
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +3
Query: 147 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 326
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2937 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2993
Query: 327 VTT 335
V T
Sbjct: 2994 VNT 2996
Score = 27.1 bits (57), Expect = 1.5
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNPL* 233
S S ++++S L +T S + T TP T SS L S+ P+ SSSILN
Sbjct: 374 SPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSV---LNSSTPITSSSILNSST 430
Query: 234 LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 341
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 431 PITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 468
Score = 27.1 bits (57), Expect = 1.5
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +3
Query: 75 SCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNPL*LTRSAL 251
S ++++S L +T + + T TP T SS L S+ P+ SSS+LN S+
Sbjct: 608 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSV---LNSSTPITSSSVLNSSTPITSST 664
Query: 252 AHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 341
A S I ++ L P T T L +TP+
Sbjct: 665 ALNTSTPITSSSVLNSSTPITSSTALNTSTPI 696
Score = 27.1 bits (57), Expect = 1.5
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S +L T S S + + + I ST N +T + V + TP T S+A L ++
Sbjct: 1023 STALNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNTS 1077
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
P+ SSS+LN S+ S I ++ L P T+ VV T
Sbjct: 1078 TPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT 1124
Score = 27.1 bits (57), Expect = 1.5
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF-----PVPSSSIL 221
S P S AL+T++ + L + + T+ S +S+ P +ST P+ SSS+L
Sbjct: 1904 SSTPITSSTALNTSTPITSSSVLNSSTPI-TSSSVLNSSTPITSSTVVNSSTPITSSSVL 1962
Query: 222 NPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
N S+ A S I ++ L P T+ V+ T
Sbjct: 1963 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNT 2000
Score = 27.1 bits (57), Expect = 1.5
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF-----PVPSSSIL 221
S P S ++T++++ L + + T+ S +S+ P +ST P+ SSS+L
Sbjct: 2408 SSTPITSSTVVNTSTSITSSSVLNSSTPI-TSSSVLNSSTPITSSTVVNSSTPITSSSVL 2466
Query: 222 NPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
N S+ A S I ++ L P T+ VV T
Sbjct: 2467 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 2504
Score = 26.6 bits (56), Expect = 2.0
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 236
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 1580 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 1631
Query: 237 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 341
S+ S I ++ +L P T+ VV +TP+
Sbjct: 1632 ITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPI 1668
Score = 26.2 bits (55), Expect = 2.7
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S+S+ + P + S + S +++++ L +T + + T TP T SS L S+
Sbjct: 410 SSSVLNSSTPITSSSI-LNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSV---LNSS 465
Query: 195 FPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVVTTPL 341
P+ SSS+LN +T S + +T + + ++ + +T L +TP+
Sbjct: 466 TPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPI 516
Score = 26.2 bits (55), Expect = 2.7
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Frame = +3
Query: 18 SASLYTLAKP-ESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAS 191
S+S+ + P S S + + + I ST N +T S V + TP T S+A L +
Sbjct: 1538 SSSVLNSSTPITSSSVLNSSTPITSSTVVNTST--PITSSSVVNSSTPITSSTA---LNT 1592
Query: 192 TFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 341
+ P+ SSS+LN S+ A S I ++ L P T T+L +TP+
Sbjct: 1593 STPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 1644
Score = 26.2 bits (55), Expect = 2.7
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S +L T S S + + + I ST N +T + V + TP T S+A L ++
Sbjct: 1803 STALNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNTS 1857
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 341
P+ SSS+LN S+ A S I ++ L P T T+L +TP+
Sbjct: 1858 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 1908
Score = 25.8 bits (54), Expect = 3.5
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 147 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 326
+TP T S+A L ++ P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 3381 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTV 3437
Query: 327 V--TTPL 341
V +TP+
Sbjct: 3438 VNSSTPI 3444
Score = 25.4 bits (53), Expect = 4.7
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 236
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 1844 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 1895
Query: 237 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 341
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 1896 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 1932
Score = 25.4 bits (53), Expect = 4.7
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 147 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 323
+TP T S+A L ++ P+ SSS+LN +T S++ +T S I ++ L P T+
Sbjct: 1965 STPITSSTA---LNTSTPITSSSVLNSSTPITSSSVLNT-STPITSSSVLNSSTPITSST 2020
Query: 324 VVTT 335
VV T
Sbjct: 2021 VVNT 2024
Score = 25.4 bits (53), Expect = 4.7
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S+ L T S S + + + I ST N +T + V + TP T S+A L ++
Sbjct: 1995 SSVLNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNTS 2049
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 341
P+ SSS+LN S+ A S I ++ L P T T+L +TP+
Sbjct: 2050 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 2100
Score = 25.4 bits (53), Expect = 4.7
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 236
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 2036 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 2087
Query: 237 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 341
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 2088 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 2124
Score = 25.4 bits (53), Expect = 4.7
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 147 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 323
+TP T S+A L ++ P+ SSS+LN +T S + +T S I ++ L P T+
Sbjct: 2301 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSST 2356
Query: 324 VVTT 335
VV T
Sbjct: 2357 VVNT 2360
Score = 25.4 bits (53), Expect = 4.7
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 147 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 323
+TP T S+A L ++ P+ SSS+LN +T S + +T S I ++ L P T+
Sbjct: 2709 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSST 2764
Query: 324 VVTT 335
VV T
Sbjct: 2765 VVNT 2768
Score = 25.4 bits (53), Expect = 4.7
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S+S+ + P + S + + ++++S L +T + V T TP T S+A L ++
Sbjct: 2726 SSSVLNSSTPITSSTV-VNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTA---LNTS 2781
Query: 195 FPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVVTTPL 341
P+ SSS+LN +T S + +T + + ++ + +T+L +TP+
Sbjct: 2782 TPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPI 2832
Score = 25.0 bits (52), Expect = 6.2
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +3
Query: 57 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL* 233
S P S AL+T++ + L +TP T S+ L S+ P+ SSS+LN
Sbjct: 1064 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTV---LNSSTPITSSSVLNSSTP 1115
Query: 234 LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 341
+T S + +T S I ++ +L P T+ V+ +TP+
Sbjct: 1116 ITSSTVVNT-STPITSSTALNTSTPITSSSVLNSSTPI 1152
Score = 25.0 bits (52), Expect = 6.2
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S +L T S S + + + I STA N +T S + + TP T S+ + ++
Sbjct: 1275 STALNTSIPITSSSVLNSSTPITSSTALNTST--SITSSSVLNSSTPITSSTV---VNTS 1329
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
P+ SSS+LN S+ S I ++ + P T+ VV T
Sbjct: 1330 TPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNT 1376
Score = 25.0 bits (52), Expect = 6.2
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S +L T S S + + + I ST N +T + V + TP T S+ L S+
Sbjct: 2775 STALNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTV---LNSS 2829
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
P+ SSS+LN S+ A S I ++ L P T+ + T
Sbjct: 2830 TPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALNT 2876
Score = 25.0 bits (52), Expect = 6.2
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S +L T S S + + + I ST N +T + + T TP T S+ + S+
Sbjct: 3387 STALNTSTPITSSSVLNSSTPITSSTVVNSST--PITSSTALNTSTPITSSTV---VNSS 3441
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 335
P+ SSS+LN S+ S I ++ L P ++ V+T+
Sbjct: 3442 TPITSSSVLNSSTAIASSSILNSSTPITSSSVLNSSTPISSSTVITS 3488
Score = 24.6 bits (51), Expect = 8.2
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +3
Query: 51 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNP 227
S S + + + I ST N +TR S + + TP T S+ L S+ P+ SSS+LN
Sbjct: 566 SSSVLNSSTPITSSTVVNTST--PITRYSVLNSSTPITSSTV---LNSSTPITSSSVLNS 620
Query: 228 L*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 341
S+ A S I ++ L P T+ V+ +TP+
Sbjct: 621 STPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPI 660
Score = 24.6 bits (51), Expect = 8.2
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = +3
Query: 18 SASLYTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELAST 194
S +L T S S + + + I ST N +T + V + TP T S+A L ++
Sbjct: 867 STALNTSTPITSSSVLNSSTPITSSTVVNTST--PITSSTVVNSSTPITSSTA---LNTS 921
Query: 195 FPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 341
P+ SSS+LN S+ S I ++ L P T T+L +TP+
Sbjct: 922 TPITSSSVLNSSTPITSSTGLNTSTPITSSSVLNSSTPITSSTVLNSSTPI 972
Score = 24.6 bits (51), Expect = 8.2
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 99 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFI 275
S+ +V S ST ++ L S+ P+ SSS+LN +T S + +T S I
Sbjct: 1370 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPI 1428
Query: 276 QNNLSLVRRMPQTTMLVVTT 335
++ + P T+ VV T
Sbjct: 1429 TSSTVVNSSTPITSSTVVNT 1448
Score = 24.6 bits (51), Expect = 8.2
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 147 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTM 320
+TP T SS L S+ P+ SSS+LN +T S + +T + ++ ++ + +T
Sbjct: 1533 STPITSSSV---LNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTA 1589
Query: 321 LVVTTPL 341
L +TP+
Sbjct: 1590 LNTSTPI 1596
Score = 24.6 bits (51), Expect = 8.2
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 147 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TM 320
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T T
Sbjct: 1749 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTA 1805
Query: 321 LVVTTPL 341
L +TP+
Sbjct: 1806 LNTSTPI 1812
Score = 24.6 bits (51), Expect = 8.2
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 147 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 326
+TP T S+A L ++ P+ SSS+LN S+ S I ++ + P T+ V
Sbjct: 2157 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTV 2213
Query: 327 VTT 335
V T
Sbjct: 2214 VNT 2216
Score = 24.6 bits (51), Expect = 8.2
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 99 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFI 275
S+ +V S ST ++ L S+ P+ SSS+LN +T S + +T S I
Sbjct: 2210 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPI 2268
Query: 276 QNNLSLVRRMPQTTMLVVTT 335
++ + P T+ VV T
Sbjct: 2269 TSSTVVNSSTPITSSTVVNT 2288
>SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 351
Score = 30.7 bits (66), Expect = 0.12
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Frame = +3
Query: 21 ASLYTLAKPESRSEMPAGSCIALSTASNLMVR-CQLTRPSGVETT---PSTRSSARPEL- 185
A+ Y + E + ++ G I TA N + + R G + P+T+S A+ +
Sbjct: 57 AAYYVVRDAEKKGKLSRGGTIVEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTL 116
Query: 186 ----ASTFPVPSSSILNPL*LTRSALAHTDS 266
A PVP + NPL A H +S
Sbjct: 117 KFLGAEVHPVPVAPFSNPLNYNHQARRHAES 147
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.12
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 51 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN 224
S S + + + ST S+L ++PS T+ ST SSA P S+ + SSS+++
Sbjct: 160 SSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVS 217
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.9 bits (59), Expect = 0.88
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = +3
Query: 30 YTLAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPS 209
++ A+ + S+ + S + Q +PSGVE T ++R++A+ + ST + S
Sbjct: 12 FSYARALASSQSNKSNSTKASENNTATAEKQAVKPSGVEPTNTSRANAQKKTESTGKITS 71
Query: 210 SS 215
+
Sbjct: 72 EA 73
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 27.5 bits (58), Expect = 1.2
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = -2
Query: 472 HEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYDFLSNGVVTTSIVVCGILLT 293
HE+ + +TG ++ +++E ++A D E+QV + S G + VV LL
Sbjct: 108 HEKPARPQTGEGSDNEDEDEDIDALIEDLYSQDQEEEQVEEEESPGPAGAAKVVPEELLE 167
Query: 292 SDKLFWMKQLSV 257
+D + + + V
Sbjct: 168 TDPKYGLTESEV 179
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 27.1 bits (57), Expect = 1.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 180 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV 329
E+ F VP +S LNP S +TD +++ N+ + R+ T +++
Sbjct: 218 EVKDLFYVPLTSFLNPKHQKISRFRNTDLLYVEFNIDKIPRIWGITAVIL 267
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 26.2 bits (55), Expect = 2.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 132 PSGVETTPSTRSSARPELASTFPV 203
P+ VETTPST +SA + + F +
Sbjct: 350 PANVETTPSTATSAPKKSTAPFAI 373
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 2.7
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 45 PESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN 224
P S S + LST+S ++ T SG PST SS+ P +S P +S+L+
Sbjct: 483 PISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPST-SSSTPS-SSIISSPMTSVLS 540
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 4.7
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -2
Query: 376 DAVEDQVYDFLSNGVVT-TSIVVC 308
DA DQ+ +++ NG++T T IV C
Sbjct: 68 DATIDQLQNYMENGILTSTDIVHC 91
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 6.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 140 PRWSCQLASDHQVGCRAQGNTAPSRHFRSGLR 45
P SC+L S+H+ C + N++ S + + R
Sbjct: 110 PHLSCELPSEHREKCLKRRNSSLSSNLHANKR 141
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 25.0 bits (52), Expect = 6.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 240 RSALAHTDSCFIQNNLSLVRRMPQT 314
+S + HT++ NN SL+RR+ T
Sbjct: 605 KSLIQHTNNLLQSNNASLLRRLAAT 629
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 6.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 169 EERVEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGL 41
EE EG TP +T+R D+V++ + AG++D+ S L
Sbjct: 320 EEISEGEEYTPIEESKEPITVRRDSVIQIDESSAGLTDVISEL 362
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 24.6 bits (51), Expect = 8.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 296 KEDAANNYARGHYTIGKEIVDLV 364
+E ANN+ RGH I K+ D +
Sbjct: 599 RERKANNFFRGHIEIDKKTKDFL 621
>SPBC3B9.09 |vps36||RBZ zinc finger protein
Vps36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 467
Score = 24.6 bits (51), Expect = 8.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 6 RKCVSASLYTLAKPESRSEMPAGSCIA 86
R C A+ +T+ KP+S + G C A
Sbjct: 117 RNCGVANRFTIIKPKSDARFSQGLCTA 143
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 24.6 bits (51), Expect = 8.2
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 475 LHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYDFLS-NGVV 329
LH + + + ++ ED+ +C ++S AD + + L+ NG++
Sbjct: 1078 LHSQPIQNVSDVNNKKDEDDHEQTSCLIISGIADVFSENMSLLLNVNGIL 1127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,169,958
Number of Sequences: 5004
Number of extensions: 47951
Number of successful extensions: 256
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 234
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 192109570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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