Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_C23
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17689-1|CAA76814.1|  111|Anopheles gambiae gSG2 protein protein.      29   0.13 
AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.     29   0.13 
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    24   3.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.0  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   8.7  

>Y17689-1|CAA76814.1|  111|Anopheles gambiae gSG2 protein protein.
          Length = 111

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = -2

Query: 504 NSLIQSFRNVSIRSKTT--PSLPGFSSFLENISTTSYFFSSLSAGFCLFFI 358
           N   QSF N S  S  T  P LP F SFL N+   +  F   S  F  F I
Sbjct: 36  NGTGQSF-NFSGESNGTSIPGLPDFGSFLPNLGNLTQQFGGSSGAFPQFSI 85


>AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.
          Length = 114

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = -2

Query: 504 NSLIQSFRNVSIRSKTT--PSLPGFSSFLENISTTSYFFSSLSAGFCLFFI 358
           N   QSF N S  S  T  P LP F SFL N+   +  F   S  F  F I
Sbjct: 36  NGTGQSF-NFSGESNGTSIPGLPDFGSFLPNLGNLTQQFGGSSGAFPQFSI 85


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 68  PREEIAYYSTIQGQQKEPYLPPVLLDSLHKFVLGVNIH 181
           PR  ++ +  ++G     Y+PP+  DSL +  LG  I+
Sbjct: 27  PRFLLSRHKNLEGSAM--YVPPLYCDSLSQSFLGSTIN 62


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 501  SLIQSFRNVSIRSKTTPSLPGFSSFLENIST 409
            + I + R V    K+  S+PGFS FL+ +ST
Sbjct: 2995 TFIVTLRMVDAYEKS--SIPGFSVFLQILST 3023


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 133 CLIRFTAQVCIGCK 174
           C IR+T + CI CK
Sbjct: 308 CGIRWTCECCIECK 321


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,573
Number of Sequences: 2352
Number of extensions: 11587
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)