Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_C21
         (325 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.40 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.40 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   0.70 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   1.6  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   4.9  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    20   6.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   6.5  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    20   6.5  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    20   6.5  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   8.6  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   8.6  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   8.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   8.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 0.40
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 314 VSFCIRNPNIFLVINNKIKIFLINPSTYL 228
           V  C +   I   I   ++ +LIN STYL
Sbjct: 273 VGSCRKTDQILYFIRGCLQTYLINASTYL 301


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 0.40
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 314 VSFCIRNPNIFLVINNKIKIFLINPSTYL 228
           V  C +   I   I   ++ +LIN STYL
Sbjct: 311 VGSCRKTDQILYFIRGCLQTYLINASTYL 339


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 0.70
 Identities = 11/49 (22%), Positives = 16/49 (32%)
 Frame = -1

Query: 172 PGTLVIFENEKXXXXXXXXXXXLGVTSAIYQKKSHQNSYSPSGDCPEQT 26
           PGT+                    V +A        NS SP+G  P+ +
Sbjct: 24  PGTIQACTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHS 72


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = -1

Query: 100 VTSAIYQKKSHQN 62
           VTSAI+Q+KS +N
Sbjct: 18  VTSAIHQRKSSKN 30


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 208 GLYSIF*VLIFLPGTLVIFEN 146
           GL+S+F  LI +   +VI  N
Sbjct: 64  GLFSVFSFLILVSSYIVILVN 84


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 147 FSKITRVPGKKIKTQKIEYNPIQCTVSQVSAW 242
           F +I +     IK  KI YNP       +S W
Sbjct: 94  FEEIKKEVSSYIK--KIGYNPAAVAFVPISGW 123


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -3

Query: 137 LYPIPILYHVTRSNFSYLPKK-VPS 66
           L P PI  H T  +F   P K +PS
Sbjct: 653 LLPRPISCHTTPDSFIEAPNKTLPS 677


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 147 FSKITRVPGKKIKTQKIEYNPIQCTVSQVSAW 242
           F +I +     IK  KI YNP       +S W
Sbjct: 110 FEEIKKEVSSYIK--KIGYNPAAVAFVPISGW 139


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 147 FSKITRVPGKKIKTQKIEYNPIQCTVSQVSAW 242
           F +I +     IK  KI YNP       +S W
Sbjct: 167 FEEIKKEVSSYIK--KIGYNPAAVAFVPISGW 196


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 51  LREIAQNKQTRQKIAS 4
           +R +AQ+ +T Q IAS
Sbjct: 341 IRTVAQSDETLQMIAS 356


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 51  LREIAQNKQTRQKIAS 4
           +R +AQ+ +T Q IAS
Sbjct: 341 IRTVAQSDETLQMIAS 356


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 51  LREIAQNKQTRQKIAS 4
           +R +AQ+ +T Q IAS
Sbjct: 341 IRTVAQSDETLQMIAS 356


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -3

Query: 140 VLYPIPILYHVTRSNFSYLPKKVPSKF 60
           + +  PI+  V  + ++ L +K+P  F
Sbjct: 818 IAFAYPIMLIVVCTVYAVLTRKIPEAF 844


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,988
Number of Sequences: 438
Number of extensions: 1641
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)