Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_C17
(459 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 247 4e-66
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 245 1e-65
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 245 1e-65
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 221 3e-58
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 140 6e-34
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 140 6e-34
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 140 6e-34
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 138 2e-33
03_01_0034 + 318432-318825,318902-319851 138 2e-33
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 138 2e-33
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 127 5e-30
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 126 1e-29
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 98 3e-21
06_02_0189 - 12816751-12817088,12817272-12817330,12817745-128177... 30 0.78
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 29 1.4
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492... 29 1.8
07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342 29 2.4
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 3.1
11_04_0367 - 16840732-16843428,16844425-16844760 27 9.6
09_02_0184 - 5485231-5485743 27 9.6
08_02_1406 - 26854845-26855606 27 9.6
03_05_0204 - 21961332-21961715,21962030-21962374 27 9.6
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 247 bits (604), Expect = 4e-66
Identities = 113/150 (75%), Positives = 129/150 (86%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 189
DR+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVST
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179
Query: 190 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 369
AVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T
Sbjct: 180 AVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLT 239
Query: 370 ASLRFDGALNVDLTEFQTNLVPYPRIHFPL 459
SLRFDGA+NVD+TEFQTNLVPYPRIHF L
Sbjct: 240 TSLRFDGAINVDVTEFQTNLVPYPRIHFML 269
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 245 bits (600), Expect = 1e-65
Identities = 111/150 (74%), Positives = 129/150 (86%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 189
DRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 190 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 369
+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+T
Sbjct: 180 SVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 239
Query: 370 ASLRFDGALNVDLTEFQTNLVPYPRIHFPL 459
ASLRFDGALNVD+ EFQTNLVPYPRIHF L
Sbjct: 240 ASLRFDGALNVDVNEFQTNLVPYPRIHFML 269
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 245 bits (600), Expect = 1e-65
Identities = 111/150 (74%), Positives = 129/150 (86%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 189
DRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 190 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 369
+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRL+ Q++SS+T
Sbjct: 180 SVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 239
Query: 370 ASLRFDGALNVDLTEFQTNLVPYPRIHFPL 459
ASLRFDGALNVD+ EFQTNLVPYPRIHF L
Sbjct: 240 ASLRFDGALNVDVNEFQTNLVPYPRIHFML 269
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 221 bits (539), Expect = 3e-58
Identities = 107/171 (62%), Positives = 128/171 (74%), Gaps = 21/171 (12%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQ--- 180
DR+RKLAD CTGLQGFL+F+ LL+ERLSVDYG+KSKL F IYP+PQ
Sbjct: 180 DRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQYFF 239
Query: 181 ------------------VSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 306
+STAVVEPYNS+L+TH+ +EH+D ++DNEAIYDIC+R+LD
Sbjct: 240 MSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLD 299
Query: 307 IERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 459
IERPTYTNLNRLI Q++SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L
Sbjct: 300 IERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFML 350
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 140 bits (338), Expect = 6e-34
Identities = 62/148 (41%), Positives = 92/148 (62%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 189
D +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 190 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 369
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237
Query: 370 ASLRFDGALNVDLTEFQTNLVPYPRIHF 453
LRF G LN DL + NL+P+PR+HF
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 140 bits (338), Expect = 6e-34
Identities = 62/148 (41%), Positives = 92/148 (62%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 189
D +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 190 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 369
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237
Query: 370 ASLRFDGALNVDLTEFQTNLVPYPRIHF 453
LRF G LN DL + NL+P+PR+HF
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 140 bits (338), Expect = 6e-34
Identities = 62/148 (41%), Positives = 92/148 (62%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 189
D +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 190 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 369
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237
Query: 370 ASLRFDGALNVDLTEFQTNLVPYPRIHF 453
LRF G LN DL + NL+P+PR+HF
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 138 bits (334), Expect = 2e-33
Identities = 61/148 (41%), Positives = 92/148 (62%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 189
D +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 298 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 357
Query: 190 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 369
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 358 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 417
Query: 370 ASLRFDGALNVDLTEFQTNLVPYPRIHF 453
LRF G LN DL + NL+P+PR+HF
Sbjct: 418 CCLRFPGQLNSDLRKLAVNLIPFPRLHF 445
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 138 bits (334), Expect = 2e-33
Identities = 61/148 (41%), Positives = 92/148 (62%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 189
D +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 190 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 369
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237
Query: 370 ASLRFDGALNVDLTEFQTNLVPYPRIHF 453
LRF G LN DL + NL+P+PR+HF
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 138 bits (334), Expect = 2e-33
Identities = 61/148 (41%), Positives = 92/148 (62%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 189
D +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 118 DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
Query: 190 AVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSIT 369
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237
Query: 370 ASLRFDGALNVDLTEFQTNLVPYPRIHF 453
LRF G LN DL + NL+P+PR+HF
Sbjct: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHF 265
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 127 bits (306), Expect = 5e-30
Identities = 57/146 (39%), Positives = 87/146 (59%)
Frame = +1
Query: 16 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAV 195
IR+L GF + H LL+ ++ +Y + L F+++P+P+VS V
Sbjct: 136 IRQLGSIDNEQSGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 195
Query: 196 VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITAS 375
VEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T
Sbjct: 196 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCC 255
Query: 376 LRFDGALNVDLTEFQTNLVPYPRIHF 453
LRF G LN DL + NL+P+PR+HF
Sbjct: 256 LRFPGQLNSDLRKLAVNLIPFPRLHF 281
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 126 bits (303), Expect = 1e-29
Identities = 54/136 (39%), Positives = 84/136 (61%)
Frame = +1
Query: 46 LQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTT 225
+ GF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+
Sbjct: 151 MHGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSV 210
Query: 226 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVD 405
H +E++D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN D
Sbjct: 211 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 270
Query: 406 LTEFQTNLVPYPRIHF 453
L + NL+P+PR+HF
Sbjct: 271 LRKLAVNLIPFPRLHF 286
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 98.3 bits (234), Expect = 3e-21
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Frame = +1
Query: 10 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP-QVS 186
D I + AD L+GF++ H L+E L+ Y KK ++++P + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 187 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 366
VV+PYNS+LT ++DC ++DN A+ I L + PT+ N L+ ++S+
Sbjct: 180 DVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSAS 239
Query: 367 TASLRFDGALNVDLTEFQTNLVPYPRIHF 453
T +LR+ G +N DL +L+P PR HF
Sbjct: 240 TTTLRYPGYMNNDLVGLLASLIPTPRCHF 268
>06_02_0189 -
12816751-12817088,12817272-12817330,12817745-12817773,
12817808-12818013,12818245-12818329
Length = 238
Score = 30.3 bits (65), Expect = 0.78
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 256 FMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASL 378
F+ DN I D +R +E P + +L L QI+SS + L
Sbjct: 130 FLTDNSTIADTAKRRNFLEEPGHWSLRPLWTQIISSTSIDL 170
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = -1
Query: 354 DLADKTIEVGVGRAFNIQVTAADVIDGFIVDHESTIGVFQGGVGCKDRVVGLYNSSGHLG 175
DL D+ + + + + DVID F+V + ++ GC +R+V H+
Sbjct: 56 DLLDEQVRIWASKVRELSYDMEDVIDAFLVRVDGSV---PANPGCLERLV-------HMM 105
Query: 174 CGIDSELQFR 145
CG+ ++++ R
Sbjct: 106 CGLFTKIKVR 115
>04_04_0165 +
23247265-23247472,23248115-23248407,23249182-23249239,
23249302-23250014
Length = 423
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 422 VWNSVRSTLRAPSKRREAVIDDTIWPIRRLRL 327
+WN+ S R R EA+ID T W IR ++
Sbjct: 313 LWNTGGSCNRTEPLREEAMIDQTEWAIRNAQV 344
>07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342
Length = 287
Score = 28.7 bits (61), Expect = 2.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 293 AVTWILNARPTPTSIVLSARSYHRLPPLCVSTAP 394
+V W+ + P P+ + +A +HR PP AP
Sbjct: 98 SVAWLFDDYPPPSPVAAAAGMHHRQPPYDGVVAP 131
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 458 SGKWIRG*GTKLVWNSVRSTLRAPSKRREAVIDDTIWPIRRLR 330
S W R W+ RS R+PS+ R D P RR R
Sbjct: 1245 SRSWSRSRSRSRSWSRSRSRSRSPSRSRSRSYDQGAGPARRPR 1287
>11_04_0367 - 16840732-16843428,16844425-16844760
Length = 1010
Score = 26.6 bits (56), Expect = 9.6
Identities = 14/64 (21%), Positives = 32/64 (50%)
Frame = +1
Query: 262 VDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYP 441
V+N + + +NL + +Y+N+ + + + +S + R + L+ D + NL P
Sbjct: 574 VNNPEHFFLYCKNLRVLSLSYSNIGKALPRYISGLKLLRRLELPLDGDYLKLICNLGPTD 633
Query: 442 RIHF 453
R+ +
Sbjct: 634 RVDY 637
>09_02_0184 - 5485231-5485743
Length = 170
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 384 RRRPQCRSNGVP 419
RRRP+CRS GVP
Sbjct: 22 RRRPRCRSPGVP 33
>08_02_1406 - 26854845-26855606
Length = 253
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 67 GR*GIPGGLCIGQRVCGCGRLV 2
GR G+P C GQ VCG G V
Sbjct: 195 GRDGVPPCCCCGQCVCGGGCFV 216
>03_05_0204 - 21961332-21961715,21962030-21962374
Length = 242
Score = 26.6 bits (56), Expect = 9.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 45 PPGIPHLPLVRWWHRFWFHFSPHGA 119
PP +P P R RFW HF H A
Sbjct: 81 PPLLPADPYHRAMARFWAHFIDHKA 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,269,051
Number of Sequences: 37544
Number of extensions: 305222
Number of successful extensions: 906
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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