Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_C12
(496 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 60 1e-09
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 56 2e-08
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 56 2e-08
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 54 8e-08
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 51 4e-07
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 49 2e-06
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 48 3e-06
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 48 4e-06
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 47 7e-06
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 47 1e-05
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 46 2e-05
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 46 2e-05
10_08_0724 + 20114796-20115506 44 7e-05
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 42 2e-04
03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884 40 0.001
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 40 0.001
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 39 0.003
10_08_0721 - 20103490-20103867,20103892-20104284 37 0.008
05_04_0304 - 20048518-20049003,20049074-20049412 37 0.008
03_02_0592 - 9687700-9687933,9688515-9688591,9688891-9688999,968... 36 0.014
10_08_0402 - 17631077-17631445,17634204-17634473 34 0.055
03_02_0591 - 9682476-9682487,9682805-9682885,9683085-9683192,968... 33 0.095
03_05_0204 - 21961332-21961715,21962030-21962374 33 0.13
09_04_0448 + 17692650-17692970,17693461-17693811 32 0.29
01_04_0031 + 15271193-15271342,15272134-15272182,15272894-15273294 31 0.38
01_07_0180 + 41832357-41832680,41833024-41833367,41833789-418339... 31 0.67
07_01_0646 + 4853546-4853623,4853732-4855357,4855467-4855751,485... 30 0.89
01_07_0181 + 41836417-41836644,41837166-41837549 30 1.2
12_01_0143 + 1096622-1096882,1096951-1097264,1097361-1097382 28 3.6
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 28 3.6
02_03_0315 - 17610605-17610855,17611304-17611370,17612876-176129... 28 4.7
06_03_1142 + 27961999-27962263,27963735-27965080,27965158-279654... 27 6.3
08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350 27 8.3
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/92 (36%), Positives = 49/92 (53%)
Frame = +1
Query: 100 LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDL 279
L LY S + + ++ L E VN + EH PEF+K NP+ VP L D
Sbjct: 14 LGLYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPEFMKVNPMKFVPALVDGDA 73
Query: 280 IIADSHAILMYLFDVYGKDDNLYPKDVKKRAI 375
+I DS+AI +YL D Y + L P+D+K +A+
Sbjct: 74 VIGDSYAIALYLEDKY-PEHPLLPQDLKMKAL 104
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Frame = +1
Query: 139 AAMMVC-DILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDLIIADSHAILMYL 315
A +++C + + E+V+V+FT MEH PE LK+NP +P + DL + +S AI Y+
Sbjct: 16 ARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYI 75
Query: 316 FDVY--GKDDNLYPKDVKKRAIVNRMLFFDTAILYSRFSSIVYPAYVEGCRTVTDKQLKA 489
Y + D L ++++ A+V+ +T S S IVY + K
Sbjct: 76 LRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKV 135
Query: 490 VD 495
VD
Sbjct: 136 VD 137
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 55.6 bits (128), Expect = 2e-08
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 100 LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVL-EHDD 276
LKLY S + + + L E +N E PEF K NP+ VP L + DD
Sbjct: 26 LKLYSFWRSSCSYRVRIALSLKGLDYEYKPINLLANEQSHPEFEKLNPMKYVPALVDGDD 85
Query: 277 LIIADSHAILMYLFDVYGKDDNLYPKDVKKRAI 375
++ DS AIL+YL D Y + L P+D K +A+
Sbjct: 86 TVVVDSFAILLYLEDTYPQHP-LLPQDPKMKAL 117
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 53.6 bits (123), Expect = 8e-08
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Frame = +1
Query: 139 AAMMVC-DILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDLIIADSHAILMYL 315
A ++VC + + + E+V+++F MEH PE LK+NP +P + DL++ +S A+ Y+
Sbjct: 16 ARVLVCLEEVGVEYELVNIDFKAMEHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYI 75
Query: 316 FDVYGKDD-NLYPK-DVKKRAIVNRMLFFDTAILYSRFSSIVY 438
Y + NL + ++ + A+V+ + + Y SSIVY
Sbjct: 76 LRKYKTSEANLLREGNLTEAAMVDIGIEVEIHQYYPVISSIVY 118
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 51.2 bits (117), Expect = 4e-07
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = +1
Query: 145 MMVC-DILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDLIIADSHAILMYLFD 321
++VC + + E+V V+F E PE +++NP +P L+ DL++ +S AI Y+
Sbjct: 18 VLVCLEEVGADYELVTVDFLAGEQNSPEHVERNPFGKIPALQDGDLVLFESRAIAKYILR 77
Query: 322 VY--GKDDNLYPKDVKKRAIVNRMLFFDTAILYSRFSSIVYPAYV 450
Y K D L D+++ A+V+ + Y S IV+ +
Sbjct: 78 KYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECII 122
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 160 ILNLPVEMVDVNFTEME-HLKPEFLKKNPVHTVPVLEHDDLIIADSHAILMYLFDVYGKD 336
+LNL + VD + + P++ K NP+ +P L DL+++DS AI +YL D Y
Sbjct: 23 VLNL--KGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKY-PQ 79
Query: 337 DNLYPKDVKKRAI 375
L PKD+KK+A+
Sbjct: 80 HALLPKDLKKKAL 92
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +1
Query: 94 MALKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHD 273
MA+K+Y + S ++ + E+V ++F+ EH PE +NP VP L+
Sbjct: 1 MAMKVYGLPMSTNVARVLVCLEEAGEQYEVVPIDFSIAEHKSPEHTSRNPFGQVPALQDG 60
Query: 274 DLIIADSHAILMYL 315
DLI+ +S AI Y+
Sbjct: 61 DLILFESRAISKYV 74
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +1
Query: 169 LPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDLIIADSHAILMYLFDVYGKDDNLY 348
L ++ +D + + P++ K NP+ VP L D I+DS AI++YL D Y + L
Sbjct: 27 LNLKGIDYEYRAVTRGDPDYGKINPIKYVPALVDGDFTISDSLAIILYLEDKYPQHP-LL 85
Query: 349 PKDVKKRAI 375
P+D+KK+A+
Sbjct: 86 PQDLKKKAL 94
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +1
Query: 145 MMVC-DILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDLIIADSHAILMYLFD 321
++VC + + E+V V+ + EH +P + +NP VP E DL + +S AI Y+
Sbjct: 18 ILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYILR 77
Query: 322 VYGKDDNLYPKDVKKRAIVNRMLFFDTAILYSRFSSIVYPAYV 450
+G D L ++ + A+V+ L +++ S I++ ++
Sbjct: 78 KHG-SDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIFQCFI 119
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +1
Query: 100 LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDL 279
+K++ P ++ + + E+VDV+F + EH P+ L +NP VP + DL
Sbjct: 4 VKVFGSAPFTNVARVLLCLEEVGADYEIVDVDFGDREHKGPDHLARNPFGQVPAFQDGDL 63
Query: 280 IIADSHAILMYLFDVYGKDDN---LYPKDVKKRAIVNRMLFFDTAILYSRFSSIVYPAYV 450
++ +S AI Y+ + D L D + A+V+ L D L R+ V+ +V
Sbjct: 64 MLFESRAICRYILRKHRATDEANLLREGDPSESAVVDAWL--DVEAL--RYEPSVHAVFV 119
Query: 451 E 453
+
Sbjct: 120 Q 120
>11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +1
Query: 100 LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVL 264
LK+Y S P+RA ++ C + + E V V+ + EHL PEF K NP+ VP +
Sbjct: 5 LKVYADRRSQPSRAIIIFCRVNRIDFEEVTVDLFKREHLSPEFKKINPMGQVPAI 59
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +1
Query: 100 LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDL 279
+K+Y SP ++ + E+V ++ + +H +PE L +NP +PVLE DL
Sbjct: 4 MKVYGWVVSPWMARVLVALEEAGAEYEVVPMSRSGGDHRRPEHLARNPFGEIPVLEDGDL 63
Query: 280 IIADSHAILMYLFDVY 327
+ S AI Y+F Y
Sbjct: 64 TLYQSRAIARYIFRKY 79
>10_08_0724 + 20114796-20115506
Length = 236
Score = 44.0 bits (99), Expect = 7e-05
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Frame = +1
Query: 100 LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVH-TVPVLEHDD 276
LKL + SP A +V ++ +LP E V+ N + L L NPVH +VPVL H
Sbjct: 7 LKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDL---LLASNPVHKSVPVLLHAG 63
Query: 277 LIIADSHAILMYLFDVY----GKDDNLYPKDVKKRAI 375
+ +S I+ Y+ +V+ G ++ P D +RA+
Sbjct: 64 RPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAV 100
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +1
Query: 94 MALKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHD 273
MAL L+ + A A++ + + VE+V + + PEFLK NP+ +PVLE
Sbjct: 1 MALVLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETP 60
Query: 274 DLIIADSHAILMYL 315
D + +S+AI Y+
Sbjct: 61 DGPVFESNAIARYV 74
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +1
Query: 34 CLNCDLVIIN*IKATYLFKSMA--LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEM 207
C C L+ + +K F ++ L L+ D + A A++ + + VE+ +
Sbjct: 540 CSICGLLYESSVKHIVFFCTIRVDLVLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGV 599
Query: 208 EHLKPEFLKKNPVHTVPVLEHDDLIIADSHAILMYL 315
+ PE+LK NP+ VP+LE D + +S+AI Y+
Sbjct: 600 SNKTPEYLKMNPIGKVPILETPDGPVFESNAIARYV 635
>03_01_0247 - 1929000-1929475,1929566-1929614,1929732-1929884
Length = 225
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +1
Query: 166 NLPVEMVDVNFTEMEHLKPEFLK-KNPVHTVPVLEHDDLIIADSHAILMYLFDVYGKDDN 342
NL E++ ++ + EH PEF+K ++P V +H D + DS AI YL + D N
Sbjct: 27 NLEFELIRIDTFKKEHKLPEFIKLRDPTGQV-TFKHGDKTLVDSRAICRYLSTQFPDDGN 85
Query: 343 --LYPKDVKKRAIVNRMLFFDTAILYSRFSSIVY 438
+Y +RA + + L + + S +V+
Sbjct: 86 RTIYGTGSLERASIEQWLQAEAQSFDAPSSELVF 119
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 39.9 bits (89), Expect = 0.001
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +1
Query: 100 LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDL 279
L++Y + S V + L ++V V+ H +P FL NP +PVL+ D
Sbjct: 8 LRVYGMALSANVVRVATVLNEKGLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGDE 67
Query: 280 IIADSHAILMYLFDVY-GKDDNLYPKDVKKRAIVNRMLFFDTAILYSRFSSIVYPAYVE 453
++ +S AI Y+ Y + +L P + A + L ++ Y S +V+ ++
Sbjct: 68 VLYESRAINRYIATKYKAEGADLLPAEASP-AKLEVWLEVESHHFYPAISGLVFQLLIK 125
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +1
Query: 94 MALKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHD 273
MAL L+ + A A++ + + VE+ + + PEFLK NP+ +PVLE
Sbjct: 25 MALVLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETP 84
Query: 274 DLIIADSHAILMYL 315
+ + +S+AI Y+
Sbjct: 85 EGAVFESNAIARYV 98
>10_08_0721 - 20103490-20103867,20103892-20104284
Length = 256
Score = 37.1 bits (82), Expect = 0.008
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +1
Query: 100 LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHT-VPVLEHDD 276
+K+ + SP A + +I + E V+ + L L NPVH VPVL H
Sbjct: 8 VKVLGVVVSPFAIRVRIALNIKGVSYEYVEEDIFNKSEL---LLTSNPVHKKVPVLIHGG 64
Query: 277 LIIADSHAILMYLFDVYGKDDNLYPKDVKKRAIVNRMLFFDTAILYSRFSSIVY 438
I++S I+ Y+ +V+ ++ P D RA+ F A + + S+++Y
Sbjct: 65 KPISESLVIVQYVDEVWAAAPSVLPADPYDRAVAR----FWAAYVDNNVSTVLY 114
>05_04_0304 - 20048518-20049003,20049074-20049412
Length = 274
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 229 LKKNPVHT-VPVLEHDDLIIADSHAILMYLFDVYGKDDNLYPKDVKKRAI 375
L+ NPVH VPVL H +A+S IL YL D + + L P D RA+
Sbjct: 53 LRLNPVHKKVPVLVHRGRPLAESVIILQYLDDAWPESRPLLPSDPFDRAL 102
>03_02_0592 -
9687700-9687933,9688515-9688591,9688891-9688999,
9689162-9689260,9689368-9689454,9689570-9689630,
9689739-9689813,9689936-9689961
Length = 255
Score = 36.3 bits (80), Expect = 0.014
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Frame = +1
Query: 103 KLYKIDPSPPARAAMMVCDILNLP--VEMVDVNFTEMEHLKPEFLKKNPVH--TVPVLEH 270
+LY P A+ A ++ + L +E+V ++ + KP + K+ TVP LEH
Sbjct: 34 RLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQD----KPAWYKEKVYEQGTVPSLEH 89
Query: 271 DDLIIADSHAILMYLFDVYGKDDNLYPKDVKKRAIVNRMLFFDTAILYSRFSSIVYPA 444
+ I+ +S ++ Y+ D + + L P+D +KR + ++ + A + +S ++ A
Sbjct: 90 NGKIMGESLDLIKYI-DSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLISKA 146
>10_08_0402 - 17631077-17631445,17634204-17634473
Length = 212
Score = 34.3 bits (75), Expect = 0.055
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 229 LKKNPVHT-VPVLEHDDLIIADSHAILMYLFDVYGKDDNLYPKDVKKRAIVNRMLFFDTA 405
L NPVH +PVL H I++S I+ Y+ +V+ ++ P+D A ++R
Sbjct: 29 LASNPVHKKIPVLLHRGKPISESLVIVQYVDEVWPPPASILPRDDPYAAAIHRFWGQYID 88
Query: 406 ILYSRFSSIVYPAYVEGCR-TVTDKQLKAVD 495
+ S +S+ +P + R TV + +A D
Sbjct: 89 DMVSTLASMQFPPRIRILRGTVPGDKDEASD 119
>03_02_0591 -
9682476-9682487,9682805-9682885,9683085-9683192,
9683307-9683383,9683495-9683603,9683696-9683794,
9684208-9684294,9684454-9684514,9684646-9684720,
9684826-9684854
Length = 245
Score = 33.5 bits (73), Expect = 0.095
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +1
Query: 232 KKNPVHTVPVLEHDDLIIADSHAILMYLFDVYGKDDNLYPKDVKKRAIVNRMLFFDTAIL 411
K P + VP LEH++ + +S ++ Y+ D + L P D +K+ +L + A
Sbjct: 78 KVYPENKVPSLEHNNQVKGESLDLVKYI-DTNFEGPALLPDDSEKQQFAEELLAYTDAFN 136
Query: 412 YSRFSSIV 435
+ +SSIV
Sbjct: 137 KASYSSIV 144
>03_05_0204 - 21961332-21961715,21962030-21962374
Length = 242
Score = 33.1 bits (72), Expect = 0.13
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 229 LKKNPVHT-VPVLEHDDLIIADSHAILMYLFDVYGKDDNLYPKDVKKRAIVNRML-FFDT 402
L KNP+H VPVL H D + +S I+ Y+ + + L P D RA+ F D
Sbjct: 45 LAKNPIHKKVPVLLHGDRAVCESLVIVEYIDEAF-NGPPLLPADPYHRAMARFWAHFIDH 103
Query: 403 AILYS 417
++S
Sbjct: 104 KAIFS 108
>09_04_0448 + 17692650-17692970,17693461-17693811
Length = 223
Score = 31.9 bits (69), Expect = 0.29
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 100 LKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPV-HTVPVLEHDD 276
+K++ + SP A + + E VD ++ + L+ NPV VPVL HD
Sbjct: 7 VKVFGMWASPMAIRVEWALRLKGVDYEYVD---EDLANKSEALLRHNPVTKKVPVLVHDG 63
Query: 277 LIIADSHAILMYLFDVYGKDDNLYPKDVKKRA 372
+A+S I+ Y+ + + + P D RA
Sbjct: 64 KPLAESTVIVEYIDEAWKHGYPIMPSDPFDRA 95
>01_04_0031 + 15271193-15271342,15272134-15272182,15272894-15273294
Length = 199
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 133 ARAAMMVC-DILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDLIIAD 291
A A ++VC + + E+V ++ E P L +NP VP + DLI+ D
Sbjct: 14 AVARVLVCLEEVGAEYELVGIHIPAGEQKSPAHLARNPFGQVPAFQDGDLILFD 67
>01_07_0180 +
41832357-41832680,41833024-41833367,41833789-41833945,
41834119-41834430,41834537-41834908
Length = 502
Score = 30.7 bits (66), Expect = 0.67
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 229 LKKNPVHT-VPVLEHDDLIIADSHAILMYLFDVYGKDDNLYPKDVKKRAI 375
L NPVH VPVL H D +++S IL Y+ + + + P D RA+
Sbjct: 320 LNHNPVHKLVPVLLHGDRSLSESLVILEYIDESF-HGPPILPTDPYDRAV 368
>07_01_0646 +
4853546-4853623,4853732-4855357,4855467-4855751,
4856131-4856277
Length = 711
Score = 30.3 bits (65), Expect = 0.89
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 88 KSMALKLYKIDPSPPARAAMMVCDILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTV 255
K A +KID S A ++ D +N PV M +++ E+E L E L+ VHTV
Sbjct: 48 KEAASGAWKIDYSGEKPATPLL-DTVNYPVHMKNLSTPELEQLAAE-LRAEIVHTV 101
>01_07_0181 + 41836417-41836644,41837166-41837549
Length = 203
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 202 EMEHLKPEFLKKNPVHT-VPVLEHDDLIIADSHAILMY 312
++++ L KNP+H VPVL H D I +S I+ Y
Sbjct: 36 DLDNKSDLLLAKNPIHKKVPVLLHGDRAICESLVIVEY 73
>12_01_0143 + 1096622-1096882,1096951-1097264,1097361-1097382
Length = 198
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 229 LKKNPVHT-VPVLEHDDLIIADSHAILMYLFDVY 327
L+ NPVH VPVL + IA+S IL ++ DV+
Sbjct: 26 LECNPVHKKVPVLIYQGKPIAESDVILEFIDDVW 59
>08_02_0499 -
17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 371 PS*IECFSLILLFYIPDLVVLCIQPM 448
PS +EC L + FYIPD++ IQ +
Sbjct: 18 PSQLECTGLRVFFYIPDILKNTIQSL 43
>02_03_0315 -
17610605-17610855,17611304-17611370,17612876-17612941,
17613037-17613158,17613245-17613428,17614262-17614494,
17614580-17614913,17615043-17615186,17615303-17615344
Length = 480
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 157 DILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDLIIADSHA 300
++ N P+E V+ E E PE + + P + VPV+ D ++ A
Sbjct: 196 EVYNPPLEEVEGGAVEEEQSVPEVINEVPNNVVPVVAPADAPVSHEEA 243
>06_03_1142 +
27961999-27962263,27963735-27965080,27965158-27965435,
27965706-27965737,27965830-27966236,27966373-27966858
Length = 937
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 271 DDLIIADSHAILMYLFDVYGKDDNLYPKDVKKRAIVNRMLFFDTAILY 414
++L + +SH + + D Y N PKD AIV+ M + + + Y
Sbjct: 711 EELNVPESHLVPLNTIDEYADALNRGPKDGGVAAIVDEMPYIEIFLSY 758
>08_02_1221 - 25371247-25371387,25371472-25372385,25372675-25373350
Length = 576
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +1
Query: 157 DILNLPVEMVDVNFTEMEHLKPEFLKKNPVHTVPVLEHDDLIIADSHAILMYLFDVYGKD 336
D+ N + ++ +F ++HL+ ++NP+ P D+ + + A++ Y+ D +
Sbjct: 488 DMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPP----RDIALKGAQAVVQYMSDASKRT 543
Query: 337 DNLYPKDVKK 366
P KK
Sbjct: 544 TKSEPMKPKK 553
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,218,441
Number of Sequences: 37544
Number of extensions: 258303
Number of successful extensions: 570
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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