Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_C10
         (488 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071292-1|AAL48914.1|  513|Drosophila melanogaster RE32485p pro...    39   0.003
AE014296-3379|AAN12133.1|  513|Drosophila melanogaster CG5130-PB...    37   0.013
AE014296-3378|AAF51612.1|  513|Drosophila melanogaster CG5130-PA...    37   0.013

>AY071292-1|AAL48914.1|  513|Drosophila melanogaster RE32485p
           protein.
          Length = 513

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = +1

Query: 268 MKEWLQWLPPPRSLLALFLAVAGFSGRLFASHFTHSPTLLVDTCHSLCRLVGLITTLLSY 447
           +K+ LQ   P      L L++  F  +L  SH TH  TLL+ + H LC +  L   +++ 
Sbjct: 2   VKDILQRCKPIPLYTVLVLSICYFVLQLILSHLTHGLTLLMASHHMLCNIFALGGCIITI 61

Query: 448 KYER 459
           KY +
Sbjct: 62  KYSK 65


>AE014296-3379|AAN12133.1|  513|Drosophila melanogaster CG5130-PB,
           isoform B protein.
          Length = 513

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = +1

Query: 268 MKEWLQWLPPPRSLLALFLAVAGFSGRLFASHFTHSPTLLVDTCHSLCRLVGLITTLLSY 447
           +K+ LQ   P      L L++  F  +L  SH TH  TLL+ + H LC +  L   +++ 
Sbjct: 2   VKDILQRCKPIPLYTVLVLSICYFVLQLILSHLTHGLTLLMASHHMLCNIFALGGCIITI 61

Query: 448 KYER 459
           K+ +
Sbjct: 62  KHSK 65


>AE014296-3378|AAF51612.1|  513|Drosophila melanogaster CG5130-PA,
           isoform A protein.
          Length = 513

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = +1

Query: 268 MKEWLQWLPPPRSLLALFLAVAGFSGRLFASHFTHSPTLLVDTCHSLCRLVGLITTLLSY 447
           +K+ LQ   P      L L++  F  +L  SH TH  TLL+ + H LC +  L   +++ 
Sbjct: 2   VKDILQRCKPIPLYTVLVLSICYFVLQLILSHLTHGLTLLMASHHMLCNIFALGGCIITI 61

Query: 448 KYER 459
           K+ +
Sbjct: 62  KHSK 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,048,059
Number of Sequences: 53049
Number of extensions: 476387
Number of successful extensions: 1157
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)