Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_C09
         (449 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.7  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   6.2  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   6.2  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   8.2  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 331 WPQEVTCVLELLTDSKYLMDEILNADDVLFAKSLLD 224
           W + +   L++L   +YL  + L   DV     LLD
Sbjct: 696 WLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLD 731


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 331 WPQEVTCVLELLTDSKYLMDEILNADDVLFAKSLLD 224
           W + +   L++L   +YL  + L   DV     LLD
Sbjct: 734 WLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLD 769


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 319 VTCVLELLTDSKYLMDEILNADDVLFAKSLLDE 221
           +TC +  L ++  L+D+  N D+ +    L D+
Sbjct: 70  ITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 319 VTCVLELLTDSKYLMDEILNADDVLFAKSLLDE 221
           +TC +  L ++  L+D+  N D+ +    L D+
Sbjct: 70  ITCYMYCLLEAFSLVDDEANVDEDIMLGLLPDQ 102


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 284 FTVGEKFKYASNFLWPFKLN 343
           F+ GE+ + +SNFL P K++
Sbjct: 142 FSTGERCRISSNFL-PNKMH 160


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +2

Query: 101 RIAEPYIAWGYPNLKSVRELV 163
           R+ +PY  W + N K    +V
Sbjct: 106 RLLQPYPDWSWANYKDCSGIV 126



 Score = 20.6 bits (41), Expect = 8.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -2

Query: 271 EILNADDVLFAKSLLDE*VGGDRDTLPVQFGETAFVHQLSDTLQVGVA 128
           +I++ + VLF   + +  +G   +  P+Q      V Q  +TLQ  VA
Sbjct: 310 KIMSKNGVLFFGLMNNSAIGCWNEHQPLQRENMDMVAQNEETLQTVVA 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,367
Number of Sequences: 438
Number of extensions: 2281
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)