Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_C07
(354 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 138 1e-33
03_01_0547 + 4093196-4093657,4094267-4095148 138 1e-33
03_01_0544 + 4082528-4082989,4083585-4084466 138 1e-33
03_01_0543 + 4076981-4077442,4078145-4079026 138 1e-33
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 56 6e-09
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 54 4e-08
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 51 2e-07
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 51 2e-07
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 50 7e-07
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 49 1e-06
02_04_0462 + 23131433-23132836 48 2e-06
01_07_0010 + 40429613-40429677,40429702-40430015,40432150-40434386 30 0.60
01_05_0154 + 18667338-18670110,18670233-18670561,18670914-186709... 30 0.60
12_02_1072 + 25834719-25834908,25837822-25838099,25839265-25839798 28 1.8
02_05_0806 - 31867656-31867724,31867872-31867929,31868038-318682... 28 1.8
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 28 1.8
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702... 28 1.8
05_04_0178 + 18775074-18775928 28 2.4
03_03_0230 - 15623648-15623653,15624333-15624383,15624477-156245... 28 2.4
10_01_0204 + 2199778-2200835,2201212-2201311 27 3.2
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 27 3.2
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 27 3.2
12_01_0346 + 2652181-2653566 27 4.2
07_03_1080 + 23815232-23817040 27 4.2
05_07_0031 - 27183252-27183317,27183542-27184282 27 4.2
08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579 27 5.6
03_06_0436 - 33910321-33910851 27 5.6
02_01_0675 - 5028910-5030379 27 5.6
11_06_0760 + 27017956-27018433,27018487-27019234,27023760-270243... 26 7.4
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 26 7.4
11_01_0225 + 1761282-1762232,1762601-1762726,1762818-1763135 26 7.4
09_02_0082 - 4060018-4061604 26 7.4
08_01_0220 - 1751367-1752854 26 7.4
02_01_0772 - 5755371-5756654,5757808-5757834 26 7.4
12_01_0237 + 1782593-1782778,1784942-1784996,1785086-1787028,178... 26 9.8
11_01_0240 + 1852186-1852371,1854183-1854237,1854391-1856267,185... 26 9.8
03_06_0136 + 31933843-31934715,31934906-31935021,31935233-319354... 26 9.8
03_01_0019 + 167900-168343,168567-168751,169076-169430 26 9.8
01_06_0223 + 27669759-27670286 26 9.8
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 138 bits (334), Expect = 1e-33
Identities = 69/109 (63%), Positives = 80/109 (73%)
Frame = +3
Query: 27 EGDNMLEPSTKMPWFKGWLVERKEGKAEGTCLIEALNAILPPARPTDKALRLPLQDVYKI 206
EGDNM+E ST + W+KG L+EAL+ I P RP+DK LRLPLQDVYKI
Sbjct: 197 EGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKI 244
Query: 207 GGIGTVPVGRVDTGILNAGTVVVIAPANITTEVKSVEMHHEALQEAVPG 353
GGIGTVPVGRV+TG+L G VV P+ +TTEVKSVEMHHEALQEA+PG
Sbjct: 245 GGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPG 293
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 138 bits (334), Expect = 1e-33
Identities = 69/109 (63%), Positives = 80/109 (73%)
Frame = +3
Query: 27 EGDNMLEPSTKMPWFKGWLVERKEGKAEGTCLIEALNAILPPARPTDKALRLPLQDVYKI 206
EGDNM+E ST + W+KG L+EAL+ I P RP+DK LRLPLQDVYKI
Sbjct: 197 EGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKI 244
Query: 207 GGIGTVPVGRVDTGILNAGTVVVIAPANITTEVKSVEMHHEALQEAVPG 353
GGIGTVPVGRV+TG+L G VV P+ +TTEVKSVEMHHEALQEA+PG
Sbjct: 245 GGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPG 293
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 138 bits (334), Expect = 1e-33
Identities = 69/109 (63%), Positives = 80/109 (73%)
Frame = +3
Query: 27 EGDNMLEPSTKMPWFKGWLVERKEGKAEGTCLIEALNAILPPARPTDKALRLPLQDVYKI 206
EGDNM+E ST + W+KG L+EAL+ I P RP+DK LRLPLQDVYKI
Sbjct: 197 EGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKI 244
Query: 207 GGIGTVPVGRVDTGILNAGTVVVIAPANITTEVKSVEMHHEALQEAVPG 353
GGIGTVPVGRV+TG+L G VV P+ +TTEVKSVEMHHEALQEA+PG
Sbjct: 245 GGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPG 293
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 138 bits (334), Expect = 1e-33
Identities = 69/109 (63%), Positives = 80/109 (73%)
Frame = +3
Query: 27 EGDNMLEPSTKMPWFKGWLVERKEGKAEGTCLIEALNAILPPARPTDKALRLPLQDVYKI 206
EGDNM+E ST + W+KG L+EAL+ I P RP+DK LRLPLQDVYKI
Sbjct: 197 EGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPSDKPLRLPLQDVYKI 244
Query: 207 GGIGTVPVGRVDTGILNAGTVVVIAPANITTEVKSVEMHHEALQEAVPG 353
GGIGTVPVGRV+TG+L G VV P+ +TTEVKSVEMHHEALQEA+PG
Sbjct: 245 GGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPG 293
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 56.4 bits (130), Expect = 6e-09
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +3
Query: 108 EGTCLIEALNAILPPARPTDKALRLPLQDVYKIGGIGTVPV-GRVDTGILNAGTVVVIAP 284
+G CL++A++ + PP+R K LRLP+ DV+ +G V + G+V+ G +G+ +++ P
Sbjct: 442 DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMP 501
Query: 285 ANITTEVKSVEMHHEALQEAVPG 353
VK++E + + A G
Sbjct: 502 FGELAVVKTIERNSSSCNLARAG 524
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 53.6 bits (123), Expect = 4e-08
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +3
Query: 111 GTCLIEALNAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVDTGILNAGTVVVIAPAN 290
G CL E L+ I P R +R+P+ D YK +GTV +G++++G ++ G +++ P
Sbjct: 162 GPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNK 219
Query: 291 ITTEVKSVEMHHEALQEAVPG 353
+V SV + ++ A PG
Sbjct: 220 ANVKVISVHCDEDRVRSAAPG 240
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 51.2 bits (117), Expect = 2e-07
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 108 EGTCLIEALNAILPPARPTDKALRLPLQDVYKIGGIGT-VPVGRVDTGILNAGTVVVIAP 284
+G CL++A++++ P+R K L LP+ DV K G G+++TG + G+ V+I+P
Sbjct: 458 QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
Query: 285 ANITTEVKSVE 317
VKS+E
Sbjct: 518 CGEVAAVKSIE 528
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 51.2 bits (117), Expect = 2e-07
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 108 EGTCLIEALNAILPPARPTDKALRLPLQDVYKIGGIGT-VPVGRVDTGILNAGTVVVIAP 284
+G CL++A++++ P+R K L LP+ DV K G G+++TG + G+ V+I+P
Sbjct: 458 QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISP 517
Query: 285 ANITTEVKSVE 317
VKS+E
Sbjct: 518 CGEVAAVKSIE 528
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 49.6 bits (113), Expect = 7e-07
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +3
Query: 120 LIEALNAILP-PARPTDKALRLPLQDVYKIGGIGTVPVGRVDTGILNAG---TVVVIAPA 287
L++A++ +P P R DK+ +P++DV+ I G GTV GRV+ G + G ++ + P+
Sbjct: 249 LMDAVDEYIPDPVRQLDKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPS 308
Query: 288 N-ITTEVKSVEMHHEALQEAVPG 353
+ T V VEM + L G
Sbjct: 309 GPLKTTVTGVEMFKKILDHGEAG 331
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 48.8 bits (111), Expect = 1e-06
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +3
Query: 108 EGTCLIEALNAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVDTGILNAGTVVVIAPA 287
+G CL E L+ I P R +R+P+ D YK +GTV +G++++G + G +++ P
Sbjct: 206 DGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPN 263
Query: 288 NITTEVKSVEMHHEALQEAVP 350
+V + + ++ A P
Sbjct: 264 KTNVKVIGISLDEHKVRRAGP 284
>02_04_0462 + 23131433-23132836
Length = 467
Score = 48.0 bits (109), Expect = 2e-06
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Frame = +3
Query: 120 LIEALNAILP-PARPTDKALRLPLQDVYKIGGIGTVPVGRVDTGILNAGTVVVIAPANIT 296
LI++++ +P P R TD L ++DV+ I G GTV GR++ G + G V I T
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRET 319
Query: 297 TE--VKSVEMHHEALQEAVPG 353
V VEM + + +A+ G
Sbjct: 320 RNCTVTGVEMFQKTMDDAMAG 340
>01_07_0010 + 40429613-40429677,40429702-40430015,40432150-40434386
Length = 871
Score = 29.9 bits (64), Expect = 0.60
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 63 PWFKGWLVERKEGKAEGTCLIEALNAILPPARPTDKALRLPLQDVYKIGGIGTVPVGR 236
PW +GW R++G+ TC ++ N ++ R A+ P + GG G GR
Sbjct: 67 PWHRGWECCREQGEGLHTCDVDRRNLVVAVLRCLPSAMG-PKSSRSEGGGGGDQDSGR 123
>01_05_0154 +
18667338-18670110,18670233-18670561,18670914-18670939,
18671678-18671783
Length = 1077
Score = 29.9 bits (64), Expect = 0.60
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 159 PTDKALRLPLQDVYKIGGIGTVPVGRVDTGILNAGTVVVIAPANITTE 302
P D RLP V ++GGIG G + + NA + V+ A + E
Sbjct: 262 PPDAGTRLPNLQVLRLGGIGNNFSGTIPASLSNATEIQVLGLARNSFE 309
>12_02_1072 + 25834719-25834908,25837822-25838099,25839265-25839798
Length = 333
Score = 28.3 bits (60), Expect = 1.8
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = -3
Query: 280 AITTTVPAFRIPVSTLPTGTVPIPPILYTSCRGRRRALSVGRAGGRMALRASIRHVP--S 107
++TTT ST PT + P+PP++ T+ + +++ + +A A++ VP S
Sbjct: 180 SLTTTTTTIVHDTST-PTSSPPLPPLMDTTLAQLQASMNTS-SSSAIAAVAALEQVPCFS 237
Query: 106 AFPSLRSTNHPLNHGILVDGSNMLSP 29
+F + ++N+ ++ V+ P
Sbjct: 238 SFSNSIASNNNNSNSATVNAQQCYLP 263
>02_05_0806 -
31867656-31867724,31867872-31867929,31868038-31868212,
31868297-31868373,31868434-31868537
Length = 160
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 90 RKEGKAEGTCLIEA-LNAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVDTG 248
R+ GKA G C E+ L + P P LP D G T+P G+ + G
Sbjct: 25 RRNGKAAGVCCCESMLMMVFYPWFPKPPGPGLPCPDRSYRGIYITIPCGKPENG 78
>01_06_0893 - 32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 271 TTVPAFRIPVSTL-PTGTVPIPPILYTS 191
++ P F++P STL PT V +PP+L S
Sbjct: 927 SSAPLFQVPRSTLPPTPAVQVPPMLSRS 954
>01_02_0020 -
10269252-10269314,10269442-10269483,10269759-10270244,
10270338-10270421,10270491-10270556,10270718-10270810,
10270901-10271987,10273338-10273362,10273881-10273899
Length = 654
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 274 TTTVPAFRIPVSTLPTGTVPIPPILYTSCRGRR-RALSVGRAGGRMA 137
T+T+P F +P T+P+ +PP + S G R V + G MA
Sbjct: 538 TSTMPMFGVPGQTIPSSASSVPP--FASLAGLPVRPSGVPQVSGAMA 582
>05_04_0178 + 18775074-18775928
Length = 284
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 232 PTGTVPIPPILYTSCRGRRRALSV-GRAGGRMALRA 128
P G P+PP L T RG R V R GR+A+ A
Sbjct: 138 PRGGAPLPPPLTTLARGGSRVRMVQERRDGRLAVYA 173
>03_03_0230 -
15623648-15623653,15624333-15624383,15624477-15624546,
15624646-15624848,15625011-15625116,15625228-15625295,
15625410-15625453,15628360-15628602,15629482-15629691,
15630207-15630287,15630289-15630355,15632167-15632386,
15632534-15632646,15634322-15634416,15634509-15634629
Length = 565
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -3
Query: 187 RGR-RRALSVGRAGGRMALRASIRHVPSAFPSLRSTNHPLNH 65
RGR RA G AGG+ RA I+ +P P+L+ + PL H
Sbjct: 313 RGRPERAGDDGLAGGQGRRRAHIKALPDEIPALKCS--PLYH 352
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 27.5 bits (58), Expect = 3.2
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 244 VSTLPTGTVP-IPPILYTSCRGRRRALSVGRAGGRMALRASIRHVPSAFPSLRSTNHP 74
+S +P +V + + S R RRR ++ RAG R++ RA +R PS S+ HP
Sbjct: 202 ISFVPCPSVSSVRSAIVFSARRRRRQSAIARAGARVS-RAGVR--PSPASSILVGVHP 256
Score = 27.1 bits (57), Expect = 4.2
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = -3
Query: 247 PVSTLPTGTVPIPP----ILYTSCRGR-RRALSVGRAGGRMALRASIRHVPSA 104
P S++ G P P L T CRGR R + RAG R++ RA +R P++
Sbjct: 288 PASSILVGVHPHRPPSSLSLSTLCRGRGGRESATARAGARVS-RAGVRPSPAS 339
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +1
Query: 13 GRFGTREITCWSRPPKCHGSRDGWLSV---KKERLKVHA 120
G GT T W PP H G+L + KKERL V A
Sbjct: 9 GDGGTTAETRWLSPPLTHDDNRGFLQMLREKKERLGVGA 47
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 27.5 bits (58), Expect = 3.2
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = -3
Query: 352 PGTASCRASWCISTD-LTSVVMLAGAITTTVPAFRIPVSTLPTGTVPIPPILYTSCRGRR 176
PG A + D + + LAG AF+ V + G +P P L + R
Sbjct: 108 PGVVFIEAEYHDDDDAVVDMRRLAGDEEHHTEAFKRLVPEMDVGRLPAP--LLSVQVTRP 165
Query: 175 RALSVGRAGGRMALRASIRHV 113
A + G +GG +A+ SI HV
Sbjct: 166 AAAAAGGSGGVVAVGVSIHHV 186
>12_01_0346 + 2652181-2653566
Length = 461
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 145 RMALRASIRHVPSAFPSLRSTNHPLNHGILVDGSNML 35
RMA ++R + P+ + +H L+HG L DG N+L
Sbjct: 201 RMAGLTTVRIIDE--PTAAAVSHGLHHGRLRDGGNVL 235
>07_03_1080 + 23815232-23817040
Length = 602
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 247 PVSTLPTGTVPIPPILYTS 191
P S+ PTGT P PP+ +S
Sbjct: 123 PASSTPTGTAPTPPLSTSS 141
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 27.1 bits (57), Expect = 4.2
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -3
Query: 262 PAFRIPVSTLPTGTVPIPPILYTSCRGRRRALSVGRAGGRMALRAS 125
PA R+P + LP V +P + R RRR+ S R GG A A+
Sbjct: 33 PAHRLPPTVLP--VVALPAGGDAATRDRRRSSSHRRGGGGGAAAAA 76
>08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579
Length = 458
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 93 YAQPTIP*TMAFWWTAPTCYLPRAESTE 10
Y +IP +AFW+ AP +P + S E
Sbjct: 238 YISDSIPLAIAFWFAAPYAGMPDSGSLE 265
>03_06_0436 - 33910321-33910851
Length = 176
Score = 26.6 bits (56), Expect = 5.6
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 220 VPIPPILYTSCRGRRRALSVGRAGGRMALRASIRHVPSAFPSL 92
+P PP RRAL RA LR +R +P A +L
Sbjct: 49 LPAPPSPDAGAHPARRALDTLRAWANPVLREFLRSLPDAVDAL 91
>02_01_0675 - 5028910-5030379
Length = 489
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 126 EALNAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVDTGILNAGTV 269
EAL ++ PP+RP +L LP D + + VG G+ A V
Sbjct: 39 EALRSLAPPSRPELLSLDLPRYDPARSTPVDLAVVGGGPAGLAVAQRV 86
>11_06_0760 +
27017956-27018433,27018487-27019234,27023760-27024378,
27030755-27032440
Length = 1176
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 117 CLIEALNAILPPARPTDKALRLPLQDVYK 203
C +E + IL + T KAL+LP +DV K
Sbjct: 793 CQLERVANILGGNKRTRKALKLPAEDVKK 821
>11_06_0388 +
23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 100 PSLRSTNHPLNHGILVDGSNMLSPSCRIDR 11
PS + P+N G V+ S ++SPSC ID+
Sbjct: 215 PSKSNLEDPVN-GNQVETSKVVSPSCSIDQ 243
>11_01_0225 + 1761282-1762232,1762601-1762726,1762818-1763135
Length = 464
Score = 26.2 bits (55), Expect = 7.4
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -3
Query: 190 CRGRRRALSVGRAGGRMALRASIRHVPSAFPSLRSTNHPLNHGILVD-GSNMLSPSCRID 14
C R L VG + RAS+R++ FP L GI+ D GS++L S +
Sbjct: 321 CVSSIRQLQVGVNFAERSHRASLRNILECFPELSMLVIWRMDGIVYDKGSDVLFDSSFVG 380
Query: 13 RGLV 2
G V
Sbjct: 381 LGSV 384
>09_02_0082 - 4060018-4061604
Length = 528
Score = 26.2 bits (55), Expect = 7.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 262 PAFRIPVSTLPTGTVPIPPI 203
PA +P ++P+ TVP PP+
Sbjct: 425 PAPPVPTPSMPSPTVPAPPV 444
>08_01_0220 - 1751367-1752854
Length = 495
Score = 26.2 bits (55), Expect = 7.4
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -3
Query: 322 CISTDLTSVVMLAGAITTTVPAFRIPVSTLPTGTVPIPPILYTSCRGRRRALSVG-RAGG 146
C L +L+ + V A +S L PIP + T RGR R + AGG
Sbjct: 297 CNHRTLLDPAVLSTVVHRKVTAVTYSLSGLSEMIAPIPTVRLTRDRGRDRVIMQSVLAGG 356
Query: 145 RMAL 134
+A+
Sbjct: 357 DLAV 360
>02_01_0772 - 5755371-5756654,5757808-5757834
Length = 436
Score = 26.2 bits (55), Expect = 7.4
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 211 PPILYTSCRGRRRALSVGRAGGRMALRASIRHVPSAFPSLRSTNHPL 71
PP+ ++C R G A R+ RA A PSLR++ HPL
Sbjct: 8 PPVDSSACLCRVERSVAGAAAARLMPRAKA----CAQPSLRASIHPL 50
>12_01_0237 + 1782593-1782778,1784942-1784996,1785086-1787028,
1787103-1787261,1787432-1787603,1787705-1788003,
1788278-1788583
Length = 1039
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -3
Query: 325 WCISTDLTSVVMLAGAITTTVPAFRIPVSTLPTGTVPI 212
W +S L S+ ++ G I +P S P G P+
Sbjct: 995 WLLSVGLGSISLIVGVILKCIPVGSGETSATPNGYRPL 1032
>11_01_0240 + 1852186-1852371,1854183-1854237,1854391-1856267,
1856342-1856500,1856692-1856863,1856965-1857263,
1857539-1857844
Length = 1017
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -3
Query: 325 WCISTDLTSVVMLAGAITTTVPAFRIPVSTLPTGTVPI 212
W +S L S+ ++ G I +P S P G P+
Sbjct: 973 WLLSVGLGSISLIVGVILKCIPVGSGETSATPNGYRPL 1010
>03_06_0136 +
31933843-31934715,31934906-31935021,31935233-31935408,
31935846-31936036,31936119-31936205,31936304-31936461,
31936555-31936765,31936856-31937005
Length = 653
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 226 GTVPIPPILYTSCRGRRRALSVG 158
G P P +LY S G +AL+ G
Sbjct: 51 GPAPTPTLLYASATGTSKALAAG 73
>03_01_0019 + 167900-168343,168567-168751,169076-169430
Length = 327
Score = 25.8 bits (54), Expect = 9.8
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -3
Query: 250 IPVSTLPTGTVPIPPILYTSCRGRRRALSVGRAGGRMALRASIRHVPS 107
IP PT T P PPI + G S G GG + RA+ P+
Sbjct: 58 IPPPVAPTPTAPTPPI-PSPGTGSSNGSSGGGGGGWLNARATWYGAPN 104
>01_06_0223 + 27669759-27670286
Length = 175
Score = 25.8 bits (54), Expect = 9.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 65 WHFGGRLQHVISLVPNRPRPR 3
W GG L+ V S P R RPR
Sbjct: 118 WTAGGALRRVASASPGRRRPR 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,500,834
Number of Sequences: 37544
Number of extensions: 219335
Number of successful extensions: 890
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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