Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_C07
(354 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 200 5e-54
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 200 5e-54
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 187 4e-50
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 94 4e-22
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 34 6e-04
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 0.81
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 3.3
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 21 4.3
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 21 5.7
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 21 5.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 5.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 20 7.5
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 20 9.9
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 20 9.9
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 20 9.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 9.9
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 200 bits (487), Expect = 5e-54
Identities = 92/108 (85%), Positives = 97/108 (89%)
Frame = +3
Query: 30 GDNMLEPSTKMPWFKGWLVERKEGKAEGTCLIEALNAILPPARPTDKALRLPLQDVYKIG 209
GDNMLE S+KMPWFKGW VERKEGK EG CLIEAL+AILPP RPTDKALRLPLQDVYKIG
Sbjct: 141 GDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIG 200
Query: 210 GIGTVPVGRVDTGILNAGTVVVIAPANITTEVKSVEMHHEALQEAVPG 353
GIGTVPVGRV+TG+L G VV APA +TTEVKSVEMHHEALQEAVPG
Sbjct: 201 GIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPG 248
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 200 bits (487), Expect = 5e-54
Identities = 92/108 (85%), Positives = 97/108 (89%)
Frame = +3
Query: 30 GDNMLEPSTKMPWFKGWLVERKEGKAEGTCLIEALNAILPPARPTDKALRLPLQDVYKIG 209
GDNMLE S+KMPWFKGW VERKEGK EG CLIEAL+AILPP RPTDKALRLPLQDVYKIG
Sbjct: 198 GDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIG 257
Query: 210 GIGTVPVGRVDTGILNAGTVVVIAPANITTEVKSVEMHHEALQEAVPG 353
GIGTVPVGRV+TG+L G VV APA +TTEVKSVEMHHEALQEAVPG
Sbjct: 258 GIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPG 305
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 187 bits (455), Expect = 4e-50
Identities = 86/108 (79%), Positives = 95/108 (87%)
Frame = +3
Query: 30 GDNMLEPSTKMPWFKGWLVERKEGKAEGTCLIEALNAILPPARPTDKALRLPLQDVYKIG 209
GDNMLEPS K PW+KGW VERK+G A+G LIEAL+AILPP+RPTDKALRLPLQDVYKIG
Sbjct: 198 GDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKALRLPLQDVYKIG 257
Query: 210 GIGTVPVGRVDTGILNAGTVVVIAPANITTEVKSVEMHHEALQEAVPG 353
GIGTVPVGRV+TGIL G +V APA +TTEVKSVEMHHEAL EA+PG
Sbjct: 258 GIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 94.3 bits (224), Expect = 4e-22
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +3
Query: 30 GDNMLEPSTKMPWFKGWLVERKEGKAEGTCLIEALNAILPPARPTDKA 173
GDNMLE S+KMPWFKGW VERKEGK EG CLIEAL+AILPP RPTDKA
Sbjct: 125 GDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKA 172
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 33.9 bits (74), Expect = 6e-04
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 306 KSVEMHHEALQEAVPG 353
KSVEMHHEAL EA+PG
Sbjct: 1 KSVEMHHEALTEALPG 16
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 0.81
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 121 RHVPSAFPSLRST-NHPLNHGILVDGSNMLSPSCRIDRG 8
+ +P + P R T NH + V G+N+++ + + G
Sbjct: 1283 QQLPPSSPQPRLTVNHAYRDAVTVPGNNLIATNTTVSSG 1321
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +2
Query: 122 YRGPQRHPSACSPH*QGSP 178
Y Q HPS PH SP
Sbjct: 316 YHPHQHHPSQYHPHRGSSP 334
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 21.0 bits (42), Expect = 4.3
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +3
Query: 3 TRPRSIRHEGDNMLEPSTKMP 65
TRP +R E + EP P
Sbjct: 27 TRPTRLRREAEPEAEPGNNRP 47
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 20.6 bits (41), Expect = 5.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 249 ILNAGTVVVIAPANITTEVKSVEMHHE 329
+L GTV I NIT ++++ M++E
Sbjct: 23 MLTRGTVNDIVSRNITMVLENLLMNYE 49
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 20.6 bits (41), Expect = 5.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 180 LPLQDVYKIGGIGTVPVGRVDTGI 251
L L+++ +IG +PV R+D+GI
Sbjct: 17 LTLEEL-QIGLRAVIPVCRIDSGI 39
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.6 bits (41), Expect = 5.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 82 WLSVKKERLKVHAL*RPSTPSFRLLAPLTRLSVF 183
W++ E+ K RP LL L RLS++
Sbjct: 3 WINRDGEKWKGKMSQRPLARMLALLVSLHRLSIY 36
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.2 bits (40), Expect = 7.5
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -1
Query: 192 LAGEDGEPCQWG 157
+ G G PC WG
Sbjct: 541 VCGVKGIPCSWG 552
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +3
Query: 3 TRPRSIRHEGDNMLEPSTKMP 65
TRP +R E EP P
Sbjct: 26 TRPTRLRREAKPEAEPGNNRP 46
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +3
Query: 3 TRPRSIRHEGDNMLEPSTKMP 65
TRP +R E EP P
Sbjct: 27 TRPARLRREAKPEAEPGNNRP 47
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 274 TTTVPAFRIPVSTLP 230
TT P F P+ +LP
Sbjct: 465 TTVAPCFEEPLPSLP 479
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 3 TRPRSIRHEGDN 38
T SI+HE DN
Sbjct: 219 TNSNSIKHESDN 230
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,039
Number of Sequences: 438
Number of extensions: 1943
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8184330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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