Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_C06
(369 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml prot... 130 7e-31
U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal prot... 130 7e-31
U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal prot... 130 7e-31
AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p pro... 130 7e-31
AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA... 130 7e-31
AE014298-2542|AAF48711.1| 133|Drosophila melanogaster CG5172-PA... 36 0.022
AY060714-1|AAL28262.1| 155|Drosophila melanogaster GH15507p pro... 35 0.038
AE014297-2857|AAF55804.1| 136|Drosophila melanogaster CG15690-P... 31 0.63
BT021227-1|AAX33375.1| 124|Drosophila melanogaster RH43429p pro... 30 0.83
BT001450-1|AAN71205.1| 719|Drosophila melanogaster GH27257p pro... 30 0.83
AF145594-1|AAD38569.1| 721|Drosophila melanogaster BcDNA.GH0191... 30 0.83
AE014296-654|AAN11564.1| 710|Drosophila melanogaster CG12076-PB... 30 0.83
AE014296-653|AAF47768.2| 721|Drosophila melanogaster CG12076-PA... 30 0.83
AY119125-1|AAM50985.1| 553|Drosophila melanogaster RE28286p pro... 29 1.4
BT015994-1|AAV36879.1| 323|Drosophila melanogaster RE52333p pro... 29 1.9
AY094724-1|AAM11077.1| 788|Drosophila melanogaster GH21171p pro... 29 1.9
AE014297-1311|AAX52946.1| 296|Drosophila melanogaster CG33512-P... 29 1.9
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA... 29 1.9
DQ375977-1|ABD37868.1| 431|Drosophila melanogaster catsup prote... 29 2.5
DQ375966-1|ABD37857.1| 431|Drosophila melanogaster catsup prote... 29 2.5
DQ375955-1|ABD37846.1| 431|Drosophila melanogaster catsup prote... 29 2.5
DQ375954-1|ABD37845.1| 431|Drosophila melanogaster catsup prote... 29 2.5
DQ375923-1|ABD37814.1| 431|Drosophila melanogaster catsup prote... 29 2.5
DQ375912-1|ABD37803.1| 431|Drosophila melanogaster catsup prote... 29 2.5
DQ375905-1|ABD37796.1| 431|Drosophila melanogaster catsup prote... 29 2.5
DQ375857-1|ABD37748.1| 431|Drosophila melanogaster catsup prote... 29 2.5
DQ375839-1|ABD37730.1| 431|Drosophila melanogaster catsup prote... 29 2.5
DQ375834-1|ABD37725.1| 431|Drosophila melanogaster catsup prote... 29 2.5
BT022325-1|AAY54741.1| 131|Drosophila melanogaster IP04544p pro... 29 2.5
AY113616-1|AAM29621.1| 112|Drosophila melanogaster RH63170p pro... 27 5.8
AF070064-1|AAC72898.1| 1296|Drosophila melanogaster cap 'n' coll... 27 5.8
AF070063-1|AAC72897.1| 805|Drosophila melanogaster cap 'n' coll... 27 5.8
AE014298-3209|ABI31002.1| 854|Drosophila melanogaster CG41480-P... 27 5.8
AE014297-3288|AAF56109.2| 805|Drosophila melanogaster CG17894-P... 27 5.8
AE014297-3287|AAF56111.2| 1383|Drosophila melanogaster CG17894-P... 27 5.8
AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U prot... 27 7.7
AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC... 27 7.7
AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB... 27 7.7
>X69120-1|CAA48872.1| 267|Drosophila melanogaster ribosoaml protein
S2 protein.
Length = 267
Score = 130 bits (313), Expect = 7e-31
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = +3
Query: 162 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 341
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 342 KQTRAGQRT 368
KQTRAGQRT
Sbjct: 97 KQTRAGQRT 105
>U01335-1|AAA87053.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 130 bits (313), Expect = 7e-31
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = +3
Query: 162 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 341
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 342 KQTRAGQRT 368
KQTRAGQRT
Sbjct: 97 KQTRAGQRT 105
>U01334-1|AAC34198.1| 267|Drosophila melanogaster ribosomal protein
S2 protein.
Length = 267
Score = 130 bits (313), Expect = 7e-31
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = +3
Query: 162 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 341
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 342 KQTRAGQRT 368
KQTRAGQRT
Sbjct: 97 KQTRAGQRT 105
>AY094799-1|AAM11152.1| 267|Drosophila melanogaster LD24077p
protein.
Length = 267
Score = 130 bits (313), Expect = 7e-31
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = +3
Query: 162 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 341
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 342 KQTRAGQRT 368
KQTRAGQRT
Sbjct: 97 KQTRAGQRT 105
>AE014134-1713|AAF52822.1| 267|Drosophila melanogaster CG5920-PA
protein.
Length = 267
Score = 130 bits (313), Expect = 7e-31
Identities = 62/69 (89%), Positives = 63/69 (91%)
Frame = +3
Query: 162 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 341
KED KEWVPVTKLGRLVREGKI LE IYL+SLPIKEFEIIDFFLG SL DEVLKIMPVQ
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSSLKDEVLKIMPVQ 96
Query: 342 KQTRAGQRT 368
KQTRAGQRT
Sbjct: 97 KQTRAGQRT 105
>AE014298-2542|AAF48711.1| 133|Drosophila melanogaster CG5172-PA,
isoform A protein.
Length = 133
Score = 35.5 bits (78), Expect = 0.022
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +2
Query: 56 WTWR-FPRRLWIP---WWRQRSWRPTWSWSRTRARPW 154
WTWR +PRRL WW +R WR W R R W
Sbjct: 78 WTWRRWPRRLAEERRRWWTRRLWRWQSRWPRRTRRLW 114
>AY060714-1|AAL28262.1| 155|Drosophila melanogaster GH15507p
protein.
Length = 155
Score = 34.7 bits (76), Expect = 0.038
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +2
Query: 92 WWRQRS-WRPTWSWSRTRARPW 154
WW +R+ WRP WS +R+ AR W
Sbjct: 123 WWERRTGWRPKWSRARSTARRW 144
>AE014297-2857|AAF55804.1| 136|Drosophila melanogaster CG15690-PA
protein.
Length = 136
Score = 30.7 bits (66), Expect = 0.63
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = -1
Query: 189 LAPTLSGLPCHGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVHRLE--LRPPLLNDQC 16
L+PT SG HGHG A + H + H +H + + H + L L Q
Sbjct: 4 LSPTTSGF-LHGHGGANAQHHQQLLHHQQQQHQQTHQQHLQQQYHHRQHSLHQQHLQRQH 62
Query: 15 SRTS 4
S TS
Sbjct: 63 SHTS 66
>BT021227-1|AAX33375.1| 124|Drosophila melanogaster RH43429p
protein.
Length = 124
Score = 30.3 bits (65), Expect = 0.83
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 59 TWRFPRRLWIPWWRQRSWRPTWSWSRTRAR 148
+W R W WWR WR WSR R
Sbjct: 26 SWWIRRIRWRRWWRWSRWRRWRRWSRWSRR 55
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 56 WTWRFPRRLWIPWWRQRSWRPTWSWSR 136
W R R W W R R WR WSR
Sbjct: 28 WIRRIRWRRWWRWSRWRRWRRWSRWSR 54
>BT001450-1|AAN71205.1| 719|Drosophila melanogaster GH27257p
protein.
Length = 719
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 156 GHGRARVRDHDHVG--RHDLCRHHGIQSRRGNRHVHRLELRP 37
G G R +HDH+G RH +HG R RH H + L P
Sbjct: 435 GRGGGRGSNHDHLGPMRHKR-SYHGAPHHRPYRHHHGMGLPP 475
>AF145594-1|AAD38569.1| 721|Drosophila melanogaster BcDNA.GH01918
protein.
Length = 721
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 156 GHGRARVRDHDHVG--RHDLCRHHGIQSRRGNRHVHRLELRP 37
G G R +HDH+G RH +HG R RH H + L P
Sbjct: 437 GRGGGRGSNHDHLGPMRHKR-SYHGAPHHRPYRHHHGMGLPP 477
>AE014296-654|AAN11564.1| 710|Drosophila melanogaster CG12076-PB,
isoform B protein.
Length = 710
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 156 GHGRARVRDHDHVG--RHDLCRHHGIQSRRGNRHVHRLELRP 37
G G R +HDH+G RH +HG R RH H + L P
Sbjct: 426 GRGGGRGSNHDHLGPMRHKR-SYHGAPHHRPYRHHHGMGLPP 466
>AE014296-653|AAF47768.2| 721|Drosophila melanogaster CG12076-PA,
isoform A protein.
Length = 721
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -1
Query: 156 GHGRARVRDHDHVG--RHDLCRHHGIQSRRGNRHVHRLELRP 37
G G R +HDH+G RH +HG R RH H + L P
Sbjct: 437 GRGGGRGSNHDHLGPMRHKR-SYHGAPHHRPYRHHHGMGLPP 477
>AY119125-1|AAM50985.1| 553|Drosophila melanogaster RE28286p
protein.
Length = 553
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 95 WRQRSWRPTWSWSRTRARPWPWQGRPERVGASHQAWS 205
WR+ RP W +R R W+ RPE A+H +S
Sbjct: 9 WRRVPQRPVWLPNRKRK----WRSRPESTYAAHYGYS 41
>BT015994-1|AAV36879.1| 323|Drosophila melanogaster RE52333p
protein.
Length = 323
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Frame = +2
Query: 83 WIPWWRQRSWRPTWSWSRTRA---RPWPW 160
W P WR W P W+WS A W W
Sbjct: 295 WSPDWRWH-WNPKWNWSNLAAGLVGIWSW 322
>AY094724-1|AAM11077.1| 788|Drosophila melanogaster GH21171p
protein.
Length = 788
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 56 WTWRFPRRLWIPWWRQRSWRPTWSWSRTRARPWPWQGR 169
W+W R + W RS R WSWS +R+R W GR
Sbjct: 747 WSWSRSR---VNWSGSRS-RVNWSWSWSRSRV-NWSGR 779
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 107 SW-RPTWSWSRTRARPWPWQGRPERVGASHQAWS 205
SW R WSWSR+R W G RV S +WS
Sbjct: 741 SWGRVNWSWSRSRVN---WSGSRSRVNWS-WSWS 770
>AE014297-1311|AAX52946.1| 296|Drosophila melanogaster CG33512-PA
protein.
Length = 296
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Frame = +2
Query: 83 WIPWWRQRSWRPTWSWSRTRA---RPWPW 160
W P WR W P W+WS A W W
Sbjct: 268 WSPDWRWH-WNPKWNWSNLAAGLVGIWSW 295
>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
protein.
Length = 2759
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 56 WTWRFPRRLWIPWWRQRSWRPTWSWSRTRARPWPWQGR 169
W+W R + W RS R WSWS +R+R W GR
Sbjct: 2718 WSWSRSR---VNWSGSRS-RVNWSWSWSRSRV-NWSGR 2750
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 107 SW-RPTWSWSRTRARPWPWQGRPERVGASHQAWS 205
SW R WSWSR+R W G RV S +WS
Sbjct: 2712 SWGRVNWSWSRSRVN---WSGSRSRVNWS-WSWS 2741
>DQ375977-1|ABD37868.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>DQ375966-1|ABD37857.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>DQ375955-1|ABD37846.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>DQ375954-1|ABD37845.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>DQ375923-1|ABD37814.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>DQ375912-1|ABD37803.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>DQ375905-1|ABD37796.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>DQ375857-1|ABD37748.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>DQ375839-1|ABD37730.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>DQ375834-1|ABD37725.1| 431|Drosophila melanogaster catsup protein
protein.
Length = 431
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHGIQSR 76
H HG DHDH G H HHG R
Sbjct: 77 HHHGHDHDHDHDHGGHH----HHGHDER 100
>BT022325-1|AAY54741.1| 131|Drosophila melanogaster IP04544p
protein.
Length = 131
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = -1
Query: 183 PTLSGLPCHGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVHRLE--LRPPLLNDQCSR 10
PT SG HGHG A + H + H +H + + H + L L Q S
Sbjct: 1 PTTSGF-LHGHGGANAQHHQQLLHHQQQQHQQTHQQHLQQQYHHRQHSLHQQHLQRQHSH 59
Query: 9 TS 4
TS
Sbjct: 60 TS 61
>AY113616-1|AAM29621.1| 112|Drosophila melanogaster RH63170p
protein.
Length = 112
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 74 RRLWIPWWRQRSWRPTWSWS-RTRARPWPWQGR 169
R LW W RP W+WS R R R W W R
Sbjct: 31 RWLWTTGWT----RPGWTWSARIRTR-WKWPTR 58
>AF070064-1|AAC72898.1| 1296|Drosophila melanogaster cap 'n' collar
isoform C protein.
Length = 1296
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -1
Query: 165 PCHGHGRARVRDHDHVGRHDLCRHH 91
P HGH A H H H HH
Sbjct: 505 PHHGHPHAHPHSHHHASMHHAHAHH 529
>AF070063-1|AAC72897.1| 805|Drosophila melanogaster cap 'n' collar
isoform B protein.
Length = 805
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -1
Query: 165 PCHGHGRARVRDHDHVGRHDLCRHH 91
P HGH A H H H HH
Sbjct: 14 PHHGHPHAHPHSHHHASMHHAHAHH 38
>AE014298-3209|ABI31002.1| 854|Drosophila melanogaster CG41480-PA
protein.
Length = 854
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 219 LHGQ-GDQAW*LAPTLSGLPCHGHGRARVRDH-DHVGRHDLCRHHGIQSRR 73
+H Q G+ ++ ++S + CHG+G+ R +D G DL R G +R
Sbjct: 490 IHEQTGNYSYVAFSSVSAVVCHGNGKPRQQDTLRSNGERDLVRERGELEKR 540
>AE014297-3288|AAF56109.2| 805|Drosophila melanogaster CG17894-PB,
isoform B protein.
Length = 805
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -1
Query: 165 PCHGHGRARVRDHDHVGRHDLCRHH 91
P HGH A H H H HH
Sbjct: 14 PHHGHPHAHPHSHHHASMHHAHAHH 38
>AE014297-3287|AAF56111.2| 1383|Drosophila melanogaster CG17894-PC,
isoform C protein.
Length = 1383
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -1
Query: 165 PCHGHGRARVRDHDHVGRHDLCRHH 91
P HGH A H H H HH
Sbjct: 592 PHHGHPHAHPHSHHHASMHHAHAHH 616
>AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U protein
protein.
Length = 1910
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHG 88
HGHG H G H + HHG
Sbjct: 1836 HGHGHGGHGGHGGHGEHQMHHHHG 1859
>AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC,
isoform C protein.
Length = 2148
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHG 88
HGHG H G H + HHG
Sbjct: 2074 HGHGHGGHGGHGGHGEHQMHHHHG 2097
>AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB,
isoform B protein.
Length = 2196
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -1
Query: 159 HGHGRARVRDHDHVGRHDLCRHHG 88
HGHG H G H + HHG
Sbjct: 2122 HGHGHGGHGGHGGHGEHQMHHHHG 2145
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,334,891
Number of Sequences: 53049
Number of extensions: 283237
Number of successful extensions: 1500
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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